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BMC Bioinformatics|December 12, 2018
BiSpark: a Spark-based highly scalable aligner for bisulfite sequencing dataSeokjun Soe, Yoonjae Park, Heejoon ChaeBMC Medical Genomics|June 6, 2015
Combined analysis of gene regulatory network and SNV information enhances identification of potential gene markers in mouse knockout studies with small number of samplesBenjamin Hur, Heejoon Chae, Sun KimMicromachines|February 27, 2026
The Evolution of Lithography: From Resolution Scaling to Manufacturing ConstraintsHeejoon Chae, Hyunje Park, Dae Joon KangBriefings in Bioinformatics|April 1, 2020
Machine learning-based analysis of multi-omics data on the cloud for investigating gene regulationsMinsik Oh, Sungjoon Park, Sun Kim, et al.Peerj|November 3, 2025
FastST: an efficient tool for inferring decomposition and directionality of microbial communitiesJoung Min Choi, Xiaowei Wu, Liqing ZhangJournal of Bioinformatics and Computational Biology|December 21, 2018
Cloud-BS: A MapReduce-based bisulfite sequencing aligner on cloudJoungmin Choi, Yoonjae Park, Sun Kim, et al.Methods (San Diego, Calif.)|July 2, 2014
DegPack: a web package using a non-parametric and information theoretic algorithm to identify differentially expressed genes in multiclass RNA-seq samplesJaehyun An, Kwangsoo Kim, Heejoon Chae, et al.Small (Weinheim an Der Bergstrasse, Germany)|April 21, 2024
Rapid In-Plane Pattern Growth for Large-Area Inverse Replication Through Electrohydrodynamic Instability of Polymer FilmsHyunje Park, Jaeseok Hwang, Heejoon Chae, et al.Epigenetics & Chromatin|June 30, 2026
CancerSubtyper: a deep learning framework for cancer subtyping through DNA methylation dataJoung Min Choi, Yat Fei Cheung, Liqing ZhangBioinformatics (Oxford, England)|October 2, 2014
BioVLAB-MMIA-NGS: microRNA-mRNA integrated analysis using high-throughput sequencing dataHeejoon Chae, Sungmin Rhee, Kenneth P Nephew, et al.Pageof 5