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Journal of Computational Biology : a Journal of Computational Molecular Cell Biology|October 3, 2025
BCtypeFinder: A Semi-Supervised Model with Domain Adaptation for Breast Cancer Subtyping Using DNA Methylation ProfilesJoung Min Choi, Liqing ZhangBiorxiv : the Preprint Server for Biology|November 24, 2025
CancerSubminer: an integrated framework for cancer subtyping using supervised and unsupervised learning on DNA methylation profilesJoung Min Choi, Liqing ZhangPeerj|November 3, 2025
FastST: an efficient tool for inferring decomposition and directionality of microbial communitiesJoung Min Choi, Xiaowei Wu, Liqing ZhangEpigenetics & Chromatin|June 30, 2026
CancerSubtyper: a deep learning framework for cancer subtyping through DNA methylation dataJoung Min Choi, Yat Fei Cheung, Liqing ZhangBiorxiv : the Preprint Server for Biology|November 19, 2025
Leveraging AI for facioscapulohumeral muscular dystrophy prediction and omics biomarker identificationJoung Min Choi, Yi-Wen Chen, Liqing ZhangBioinformatics (Oxford, England)|April 26, 2023
DeepMicroGen: a generative adversarial network-based method for longitudinal microbiome data imputationJoung Min Choi, Ming Ji, Layne T Watson, et al.Biorxiv : the Preprint Server for Biology|January 27, 2025
ARGfore: A multivariate framework for forecasting antibiotic resistance gene abundances using time-series metagenomic datasetsJoung Min Choi, Monjura Afrin Rumi, Peter J Vikesland, et al.Journal of Drugs in Dermatology : JDD|October 3, 2024
Primary Hyperhidrosis and Sensitive Skin: Exploring the Link with Predictive Machine Learning-Based Classification ModelsErika T McCormick, Joung Min Choi, Sara Abdel Azim, et al.Epigenetics & Chromatin|February 4, 2023
The impact of spatial correlation on methylation entropy with application to mouse brain methylomeXiaowei Wu, Joung Min ChoiBMC Bioinformatics|April 26, 2023
moBRCA-net: a breast cancer subtype classification framework based on multi-omics attention neural networksJoung Min Choi, Heejoon ChaePageof 25