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Molecular Phylogenetics and Evolution|September 6, 2008
Interrelationships of Atherinomorpha (medakas, flyingfishes, killifishes, silversides, and their relatives): The first evidence based on whole mitogenome sequencesDavin H E Setiamarga, Masaki Miya, Yusuke Yamanoue, et al.
Molecular Phylogenetics and Evolution|August 22, 2007
Interrelationships of the 11 gasterosteiform families (sticklebacks, pipefishes, and their relatives): a new perspective based on whole mitogenome sequences from 75 higher teleostsRyouka Kawahara, Masaki Miya, Kohji Mabuchi, et al.
Biology Letters|July 10, 2009
Divergence time of the two regional medaka populations in Japan as a new time scale for comparative genomics of vertebratesDavin H E Setiamarga, Masaki Miya, Yusuke Yamanoue, et al.
Molecular Biology and Evolution|June 17, 2010
Evolutionary origin and phylogeny of the modern holocephalans (Chondrichthyes: Chimaeriformes): a mitogenomic perspectiveJun G Inoue, Masaki Miya, Kevin Lam, et al.
Biology Letters|January 8, 2010
Deep-ocean origin of the freshwater eelsJun G Inoue, Masaki Miya, Michael J Miller, et al.
Molecular Phylogenetics and Evolution|December 10, 2002
Major patterns of higher teleostean phylogenies: a new perspective based on 100 complete mitochondrial DNA sequencesMasaki Miya, Hirohiko Takeshima, Hiromitsu Endo, et al.
Plos One|September 12, 2013
Evolutionary origin of the Scombridae (tunas and mackerels): members of a paleogene adaptive radiation with 14 other pelagic fish familiesMasaki Miya, Matt Friedman, Takashi P Satoh, et al.
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