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Journal of Chemical Information and Modeling
|
April 9, 2021
Flexibility and Cell Permeability of Cyclic Ras-Inhibitor Peptides Revealed by the Coupled Nosé-Hoover Equation
Kei Moritsugu, Koh Takeuchi, Narutoshi Kamiya, et al.
Protein Science : a Publication of the Protein Society
|
April 2, 2005
Visualization of conformational distribution of short to medium size segments in globular proteins and identification of local structural motifs
Kazuyoshi Ikeda, Kentaro Tomii, Tsuyoshi Yokomizo, et al.
Journal of Computational Chemistry
|
March 23, 2011
Theory for trivial trajectory parallelization of multicanonical molecular dynamics and application to a polypeptide in water
Jinzen Ikebe, Koji Umezawa, Narutoshi Kamiya, et al.
Journal of Bacteriology
|
October 18, 2003
Thymine at -5 is crucial for cpc promoter activity of Synechocystis sp. strain PCC 6714
Masahiko Imashimizu, Shoko Fujiwara, Ryohei Tanigawa, et al.
Biophysics and Physicobiology
|
June 12, 2025
A virtual system-coupled molecular dynamics simulation free from experimental knowledge on binding sites: Application to RNA-ligand binding free-energy landscape
Junichi Higo, Kota Kasahara, Shun Sakuraba, et al.
Protein Engineering, Design & Selection : PEDS
|
October 15, 2019
Free-energy landscape of molecular interactions between endothelin 1 and human endothelin type B receptor: fly-casting mechanism
Junichi Higo, Kota Kasahara, Mitsuhito Wada, et al.
Journal of Computational Chemistry
|
October 14, 2016
Variation of free-energy landscape of the p53 C-terminal domain induced by acetylation: Enhanced conformational sampling
Shinji Iida, Tadaaki Mashimo, Takashi Kurosawa, et al.
Biophysics and Physicobiology
|
December 8, 2016
myPresto/omegagene: a GPU-accelerated molecular dynamics simulator tailored for enhanced conformational sampling methods with a non-Ewald electrostatic scheme
Kota Kasahara, Benson Ma, Kota Goto, et al.
Scientific Reports
|
March 18, 2021
Difference of binding modes among three ligands to a receptor mSin3B corresponding to their inhibitory activities
Tomonori Hayami, Narutoshi Kamiya, Kota Kasahara, et al.
Journal of Chemical Information and Modeling
|
September 10, 2020
Molecular Interaction Mechanism of a 14-3-3 Protein with a Phosphorylated Peptide Elucidated by Enhanced Conformational Sampling
Junichi Higo, Takeshi Kawabata, Ayumi Kusaka, et al.
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of 7
Search research articles
Search
Showing results (51-60 of 65) with videos related to
Sort By:
Page
of 7
Journal of Chemical Information and Modeling
|
April 9, 2021
Flexibility and Cell Permeability of Cyclic Ras-Inhibitor Peptides Revealed by the Coupled Nosé-Hoover Equation
Kei Moritsugu, Koh Takeuchi, Narutoshi Kamiya, et al.
Protein Science : a Publication of the Protein Society
|
April 2, 2005
Visualization of conformational distribution of short to medium size segments in globular proteins and identification of local structural motifs
Kazuyoshi Ikeda, Kentaro Tomii, Tsuyoshi Yokomizo, et al.
Journal of Computational Chemistry
|
March 23, 2011
Theory for trivial trajectory parallelization of multicanonical molecular dynamics and application to a polypeptide in water
Jinzen Ikebe, Koji Umezawa, Narutoshi Kamiya, et al.
Journal of Bacteriology
|
October 18, 2003
Thymine at -5 is crucial for cpc promoter activity of Synechocystis sp. strain PCC 6714
Masahiko Imashimizu, Shoko Fujiwara, Ryohei Tanigawa, et al.
Biophysics and Physicobiology
|
June 12, 2025
A virtual system-coupled molecular dynamics simulation free from experimental knowledge on binding sites: Application to RNA-ligand binding free-energy landscape
Junichi Higo, Kota Kasahara, Shun Sakuraba, et al.
Protein Engineering, Design & Selection : PEDS
|
October 15, 2019
Free-energy landscape of molecular interactions between endothelin 1 and human endothelin type B receptor: fly-casting mechanism
Junichi Higo, Kota Kasahara, Mitsuhito Wada, et al.
Journal of Computational Chemistry
|
October 14, 2016
Variation of free-energy landscape of the p53 C-terminal domain induced by acetylation: Enhanced conformational sampling
Shinji Iida, Tadaaki Mashimo, Takashi Kurosawa, et al.
Biophysics and Physicobiology
|
December 8, 2016
myPresto/omegagene: a GPU-accelerated molecular dynamics simulator tailored for enhanced conformational sampling methods with a non-Ewald electrostatic scheme
Kota Kasahara, Benson Ma, Kota Goto, et al.
Scientific Reports
|
March 18, 2021
Difference of binding modes among three ligands to a receptor mSin3B corresponding to their inhibitory activities
Tomonori Hayami, Narutoshi Kamiya, Kota Kasahara, et al.
Journal of Chemical Information and Modeling
|
September 10, 2020
Molecular Interaction Mechanism of a 14-3-3 Protein with a Phosphorylated Peptide Elucidated by Enhanced Conformational Sampling
Junichi Higo, Takeshi Kawabata, Ayumi Kusaka, et al.
Page
of 7