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Journal of Chemical Theory and Computation|November 21, 2024
Implementation of the UNRES/SUGRES-1P Coarse-Grained Model of Heparin for Simulating Protein/Heparin InteractionsAnnemarie Danielsson, Sergey A Samsonov, Adam K SieradzanJournal of Chemical Theory and Computation|October 23, 2012
Determination of effective potentials for the stretching of C(α) ⋯ C(α) virtual bonds in polypeptide chains for coarse-grained simulations of proteins from ab initio energy surfaces of N-methylacetamide and N-acetylpyrrolidineAdam K Sieradzan, Harold A Scheraga, Adam LiwoThe Journal of Physical Chemistry. B|August 7, 2018
Computational Studies of the Mechanical Stability for Single-Strand Break DNAPaweł Krupa, David J Wales, Adam K SieradzanPhysical Review. E|January 14, 2017
Thermal unfolding of myoglobin in the Landau-Ginzburg-Wilson approachXubiao Peng, Adam K Sieradzan, Antti J NiemiThe Journal of Physical Chemistry. B|February 15, 2017
What Makes Telomeres Unique?Adam K Sieradzan, Paweł Krupa, David J WalesJournal of Chemical Theory and Computation|September 17, 2013
Folding and self-assembly of a small protein complexAdam K Sieradzan, Adam Liwo, Ulrich H E HansmannJournal of Molecular Graphics & Modelling|November 22, 2017
Shielding effect in protein foldingAdam K Sieradzan, Agnieszka G Lipska, Emilia A LubeckaThe Journal of Chemical Physics|April 8, 2017
A general method for the derivation of the functional forms of the effective energy terms in coarse-grained energy functions of polymers. I. Backbone potentials of coarse-grained polypeptide chainsAdam K Sieradzan, Mariusz Makowski, Antoni Augustynowicz, et al.Nucleic Acids Research|May 3, 2018
UNRES server for physics-based coarse-grained simulations and prediction of protein structure, dynamics and thermodynamicsCezary Czaplewski, Agnieszka Karczynska, Adam K Sieradzan, et al.The Journal of Chemical Physics|March 18, 2014
Folding and self-assembly of a small heterotetramerFatih Yaşar, Adam K Sieradzan, Ulrich H E HansmannPageof 9