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Journal of Chemical Information and Modeling|May 4, 2026
Comparison of Protein-Glycosaminoglycan Interactions in ff14sb/GLYCAM06j-1 and CHARMM36m Force FieldsKrzysztof K Bojarski, Patryk A Wesołowski, Diksha Dewan, et al.Bioorganic Chemistry|August 13, 2022
Design, synthesis and biological evaluation of PD-1 derived peptides as inhibitors of PD-1/PD-L1 complex formation for cancer therapyMagdalena Bojko, Katarzyna Węgrzyn, Emilia Sikorska, et al.Translational Oncology|February 15, 2024
Peptide-based inhibitors targeting the PD-1/PD-L1 axis: potential immunotherapeutics for cancerMagdalena Bojko, Katarzyna Węgrzyn, Emilia Sikorska, et al.Journal of Computational Chemistry|November 15, 2022
Optimization of parallel implementation of UNRES package for coarse-grained simulations to treat large proteinsAdam K Sieradzan, Jordi Sans-Duñó, Emilia A Lubecka, et al.Methods in Molecular Biology (Clifton, N.J.)|November 30, 2021
Modeling the Structure, Dynamics, and Transformations of Proteins with the UNRES Force FieldAdam K Sieradzan, Cezary Czaplewski, Paweł Krupa, et al.Progress in Molecular Biology and Translational Science|March 9, 2020
Scale-consistent approach to the derivation of coarse-grained force fields for simulating structure, dynamics, and thermodynamics of biopolymersAdam Liwo, Cezary Czaplewski, Adam K Sieradzan, et al.Proceedings of the National Academy of Sciences of the United States of America|August 28, 2013
Lessons from application of the UNRES force field to predictions of structures of CASP10 targetsYi He, Magdalena A Mozolewska, Pawel Krupa, et al.Journal of Chemical Theory and Computation|October 3, 2023
Pragmatic Coarse-Graining of Proteins: Models and ApplicationsLuís Borges-Araújo, Ilias Patmanidis, Akhil P Singh, et al.Bioinformatics (Oxford, England)|July 6, 2016
Performance of protein-structure predictions with the physics-based UNRES force field in CASP11Paweł Krupa, Magdalena A Mozolewska, Marta Wiśniewska, et al.Journal of Molecular Modeling|July 16, 2014
A unified coarse-grained model of biological macromolecules based on mean-field multipole-multipole interactionsAdam Liwo, Maciej Baranowski, Cezary Czaplewski, et al.Pageof 9