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Journal of Computational Biology : a Journal of Computational Molecular Cell Biology
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September 25, 2024
Approximate IsoRank for Scalable and Functionally Meaningful Cross-Species Alignments of Protein Interaction Networks
Kapil Devkota, Anselm Blumer, Xiaozhe Hu, et al.
Bioinformatics (Oxford, England)
|
July 14, 2020
GLIDE: combining local methods and diffusion state embeddings to predict missing interactions in biological networks
Kapil Devkota, James M Murphy, Lenore J Cowen
Bioinformatics (Oxford, England)
|
June 27, 2022
Topsy-Turvy: integrating a global view into sequence-based PPI prediction
Rohit Singh, Kapil Devkota, Samuel Sledzieski, et al.
Bioinformatics (Oxford, England)
|
October 28, 2023
TT3D: Leveraging precomputed protein 3D sequence models to predict protein-protein interactions
Samuel Sledzieski, Kapil Devkota, Rohit Singh, et al.
Bioinformatics Advances
|
January 26, 2023
MUNDO: protein function prediction embedded in a multispecies world
Victor Arsenescu, Kapil Devkota, Mert Erden, et al.
Bioinformatics (Oxford, England)
|
May 16, 2022
GLIDER: function prediction from GLIDE-based neighborhoods
Kapil Devkota, Henri Schmidt, Matt Werenski, et al.
Plos One
|
February 16, 2023
Cell-specific imputation of drug connectivity mapping with incomplete data
Diana Sapashnik, Rebecca Newman, Christopher Michael Pietras, et al.
Biorxiv : the Preprint Server for Biology
|
November 18, 2024
Decoding the Functional Interactome of Non-Model Organisms with PHILHARMONIC
Samuel Sledzieski, Charlotte Versavel, Rohit Singh, et al.
Cellular and Molecular Life Sciences : CMLS
|
January 19, 2022
Bioengineered models of Parkinson's disease using patient-derived dopaminergic neurons exhibit distinct biological profiles in a 3D microenvironment
Nicholas J Fiore, Yosif M Ganat, Kapil Devkota, et al.
Biorxiv : the Preprint Server for Biology
|
November 24, 2025
Iterative immunogen optimization to focus immune responses on a conserved, subdominant viral epitope
Daniel J Marston, Akiko Watanabe, A Brenda Kapingidza, et al.
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Search research articles
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Showing results (1-10 of 11) with videos related to
Sort By:
Page
of 2
Journal of Computational Biology : a Journal of Computational Molecular Cell Biology
|
September 25, 2024
Approximate IsoRank for Scalable and Functionally Meaningful Cross-Species Alignments of Protein Interaction Networks
Kapil Devkota, Anselm Blumer, Xiaozhe Hu, et al.
Bioinformatics (Oxford, England)
|
July 14, 2020
GLIDE: combining local methods and diffusion state embeddings to predict missing interactions in biological networks
Kapil Devkota, James M Murphy, Lenore J Cowen
Bioinformatics (Oxford, England)
|
June 27, 2022
Topsy-Turvy: integrating a global view into sequence-based PPI prediction
Rohit Singh, Kapil Devkota, Samuel Sledzieski, et al.
Bioinformatics (Oxford, England)
|
October 28, 2023
TT3D: Leveraging precomputed protein 3D sequence models to predict protein-protein interactions
Samuel Sledzieski, Kapil Devkota, Rohit Singh, et al.
Bioinformatics Advances
|
January 26, 2023
MUNDO: protein function prediction embedded in a multispecies world
Victor Arsenescu, Kapil Devkota, Mert Erden, et al.
Bioinformatics (Oxford, England)
|
May 16, 2022
GLIDER: function prediction from GLIDE-based neighborhoods
Kapil Devkota, Henri Schmidt, Matt Werenski, et al.
Plos One
|
February 16, 2023
Cell-specific imputation of drug connectivity mapping with incomplete data
Diana Sapashnik, Rebecca Newman, Christopher Michael Pietras, et al.
Biorxiv : the Preprint Server for Biology
|
November 18, 2024
Decoding the Functional Interactome of Non-Model Organisms with PHILHARMONIC
Samuel Sledzieski, Charlotte Versavel, Rohit Singh, et al.
Cellular and Molecular Life Sciences : CMLS
|
January 19, 2022
Bioengineered models of Parkinson's disease using patient-derived dopaminergic neurons exhibit distinct biological profiles in a 3D microenvironment
Nicholas J Fiore, Yosif M Ganat, Kapil Devkota, et al.
Biorxiv : the Preprint Server for Biology
|
November 24, 2025
Iterative immunogen optimization to focus immune responses on a conserved, subdominant viral epitope
Daniel J Marston, Akiko Watanabe, A Brenda Kapingidza, et al.
Page
of 2