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Msystems|October 30, 2025
Differential recovery of chain-elongating bacteria: comparing droplet, plating, and dilution-to-extinction methodsWannes Nauwynck, Myrsini Sakarika, Karoline Faust, et al.Annual Review of Microbiology|August 15, 2015
Microbiology Meets Big Data: The Case of Gut Microbiota-Derived TrimethylamineGwen Falony, Sara Vieira-Silva, Jeroen RaesCurrent Opinion in Microbiology|October 16, 2007
Get the most out of your metagenome: computational analysis of environmental sequence dataJeroen Raes, Konrad Ulrich Foerstner, Peer BorkBMC Bioinformatics|January 23, 2024
Predicting microbial interactions with approaches based on flux balance analysis: an evaluationClémence Joseph, Haris Zafeiropoulos, Kristel Bernaerts, et al.BMC Bioinformatics|April 19, 2015
NoDe: a fast error-correction algorithm for pyrosequencing amplicon readsMohamed Mysara, Natalie Leys, Jeroen Raes, et al.Current Opinion in Microbiology|July 25, 2018
Microbial communities as dynamical systemsDidier Gonze, Katharine Z Coyte, Leo Lahti, et al.BMC Bioinformatics|May 1, 2016
IPED: a highly efficient denoising tool for Illumina MiSeq Paired-end 16S rRNA gene amplicon sequencing dataMohamed Mysara, Natalie Leys, Jeroen Raes, et al.Cell|March 10, 2018
The Human Gut Microbiome: From Association to ModulationThomas S B Schmidt, Jeroen Raes, Peer BorkBioinformatics (Oxford, England)|March 16, 2010
Pathway discovery in metabolic networks by subgraph extractionKaroline Faust, Pierre Dupont, Jérôme Callut, et al.RNA (New York, N.Y.)|October 4, 2005
Nonsense-mediated mRNA decay factors act in concert to regulate common mRNA targetsJan Rehwinkel, Ivica Letunic, Jeroen Raes, et al.Pageof 30