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Gigascience|April 4, 2017
From reads to operational taxonomic units: an ensemble processing pipeline for MiSeq amplicon sequencing dataMohamed Mysara, Mercy Njima, Natalie Leys, et al.Food Microbiology|March 13, 2018
Structure of association networks in food bacterial communitiesEugenio Parente, Teresa Zotta, Karoline Faust, et al.Cell Systems|February 16, 2023
Metabolic models of human gut microbiota: Advances and challengesDaniel Rios Garza, Didier Gonze, Haris Zafeiropoulos, et al.Plos Computational Biology|June 3, 2022
Quantifying the impact of ecological memory on the dynamics of interacting communitiesMoein Khalighi, Guilhem Sommeria-Klein, Didier Gonze, et al.Communications Biology|November 17, 2025
Growth stage and interspecies interactions shape the cell biology and cell cycle characteristics of human gut bacteria Bacteroides thetaiotaomicron and Roseburia intestinalisBin Liu, Kaat Sondervorst, Kristina Nesporova, et al.Ebiomedicine|April 4, 2021
Short chain fatty acids and its producing organisms: An overlooked therapy for IBD?Sara Deleu, Kathleen Machiels, Jeroen Raes, et al.Current Opinion in Structural Biology|June 19, 2007
Protein function space: viewing the limits or limited by our view?Jeroen Raes, Eoghan Donal Harrington, Amoolya Hardev Singh, et al.Microbial Ecology|January 26, 2019
The Dynamic of a River Model Bacterial Community in Two Different Media Reveals a Divergent Succession and an Enhanced Growth of Most Strains Compared to MonoculturesLise Goetghebuer, Mathias Bonal, Karoline Faust, et al.Molecular Biology and Evolution|May 5, 2006
An improved statistical method for detecting heterotachy in nucleotide sequencesGuy Baele, Jeroen Raes, Yves Van de Peer, et al.Applied and Environmental Microbiology|December 21, 2014
CATCh, an ensemble classifier for chimera detection in 16S rRNA sequencing studiesMohamed Mysara, Yvan Saeys, Natalie Leys, et al.Pageof 30