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Biorxiv : the Preprint Server for Biology|July 29, 2026
Phylogenize2: robust phylogenetic methods link genes to phenotypes across host-associated and environmental microbiomesKathryn Kananen, Nghi Tran, Patrick H BradleyBiorxiv : the Preprint Server for Biology|July 15, 2024
Adaptive adjustment of significance thresholds produces large gains in microbial gene annotations and metabolic insightsKathryn Kananen, Iva Veseli, Christian J Quiles Pérez, et al.Bioinformatics Advances|April 3, 2025
Adaptive adjustment of profile HMM significance thresholds improves functional and metabolic insights into microbial genomesKathryn Kananen, Iva Veseli, Christian J Quiles Pérez, et al.Biorxiv : the Preprint Server for Biology|February 27, 2026
Anaerobic riboflavin degradation by human gut LachnospiraceaeChristian J Quiles-Pérez, Alexandra Olzak, Aminata Fofana, et al.Journal of Bacteriology|July 20, 2026
Anaerobic riboflavin degradation by human gut LachnospiraceaeChristian J Quiles Pérez, Alexandria Olzak, Aminata Fofana, et al.Breast Cancer Research : BCR|November 15, 2022
Association of body mass index and inflammatory dietary pattern with breast cancer pathologic and genomic immunophenotype in the nurses' health studySarah Asad, Adrienne Damicis, Yujing J Heng, et al.Pageof 1