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Bio-Protocol
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May 20, 2026
Workflow for Fine-Tuning and Evaluating DNA Language Models for Specific Genomics Issues
Kazuki Nakamae, Hidemasa Bono
Bioinformatics Advances
|
September 4, 2023
DANGER analysis: risk-averse on/off-target assessment for CRISPR editing without a reference genome
Kazuki Nakamae, Hidemasa Bono
BMC Bioinformatics
|
April 29, 2025
PtWAVE: a high-sensitive deconvolution software of sequencing trace for the detection of large indels in genome editing
Kazuki Nakamae, Saya Ide, Nagaki Ohnuki, et al.
International Journal of Molecular Sciences
|
February 26, 2025
Risk Prediction of RNA Off-Targets of CRISPR Base Editors in Tissue-Specific Transcriptomes Using Language Models
Kazuki Nakamae, Takayuki Suzuki, Sora Yonezawa, et al.
Bioengineered
|
April 29, 2017
Establishment of expanded and streamlined pipeline of PITCh knock-in - a web-based design tool for MMEJ-mediated gene knock-in, PITCh designer, and the variations of PITCh, PITCh-TG and PITCh-KIKO
Kazuki Nakamae, Yuki Nishimura, Mitsumasa Takenaga, et al.
Nature Communications
|
August 18, 2018
Biased genome editing using the local accumulation of DSB repair molecules system
Shota Nakade, Keiji Mochida, Atsushi Kunii, et al.
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Search research articles
Search
Showing results (1-10 of 6) with videos related to
Sort By:
Page
of 1
Bio-Protocol
|
May 20, 2026
Workflow for Fine-Tuning and Evaluating DNA Language Models for Specific Genomics Issues
Kazuki Nakamae, Hidemasa Bono
Bioinformatics Advances
|
September 4, 2023
DANGER analysis: risk-averse on/off-target assessment for CRISPR editing without a reference genome
Kazuki Nakamae, Hidemasa Bono
BMC Bioinformatics
|
April 29, 2025
PtWAVE: a high-sensitive deconvolution software of sequencing trace for the detection of large indels in genome editing
Kazuki Nakamae, Saya Ide, Nagaki Ohnuki, et al.
International Journal of Molecular Sciences
|
February 26, 2025
Risk Prediction of RNA Off-Targets of CRISPR Base Editors in Tissue-Specific Transcriptomes Using Language Models
Kazuki Nakamae, Takayuki Suzuki, Sora Yonezawa, et al.
Bioengineered
|
April 29, 2017
Establishment of expanded and streamlined pipeline of PITCh knock-in - a web-based design tool for MMEJ-mediated gene knock-in, PITCh designer, and the variations of PITCh, PITCh-TG and PITCh-KIKO
Kazuki Nakamae, Yuki Nishimura, Mitsumasa Takenaga, et al.
Nature Communications
|
August 18, 2018
Biased genome editing using the local accumulation of DSB repair molecules system
Shota Nakade, Keiji Mochida, Atsushi Kunii, et al.
Page
of 1