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Cell|July 11, 2008
Seeking a new biology through text miningAndrey Rzhetsky, Michael Seringhaus, Mark GersteinGenome Biology|October 9, 2014
MUSIC: identification of enriched regions in ChIP-Seq experiments using a mappability-corrected multiscale signal processing frameworkArif Harmanci, Joel Rozowsky, Mark GersteinJournal of Biomedical Informatics|March 31, 2025
Scalable and efficient on-chain data management in blockchain for large biomedical dataEric Ni, Elizabeth Knight, Mark GersteinGenome Research|April 15, 2026
Epigenetic characterization of pseudogenes across human tissuesYunzhe Jiang, Beatrice Borsari, Mark GersteinGenes & Development|February 26, 2009
Zebrafish miR-1 and miR-133 shape muscle gene expression and regulate sarcomeric actin organizationYuichiro Mishima, Cei Abreu-Goodger, Alison A Staton, et al.International Journal of Bioinformatics Research and Applications|December 1, 2007
On mining micro-array data by Order-Preserving SubmatrixLin Cheung, David W Cheung, Ben Kao, et al.Briefings in Bioinformatics|December 15, 2015
Analysis of sequencing data for probing RNA secondary structures and protein-RNA binding in studying posttranscriptional regulationsXihao Hu, Yang Wu, Zhi John Lu, et al.BMC Genomics|December 26, 2014
Systematic exploration of autonomous modules in noisy microRNA-target networks for testing the generality of the ceRNA hypothesisDanny Kit-Sang Yip, Iris K Pang, Kevin Y YipMolecular Cell|December 31, 2013
Identification of a major determinant for serine-threonine kinase phosphoacceptor specificityCatherine Chen, Byung Hak Ha, Anastasia F Thévenin, et al.BMC Genomics|August 14, 2016
iTAR: a web server for identifying target genes of transcription factors using ChIP-seq or ChIP-chip dataChia-Chun Yang, Erik H Andrews, Min-Hsuan Chen, et al.Pageof 182