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Koen Van den Berge

Showing results (1-10 of 31) with videos related to

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Bioinformatics (Oxford, England)|November 23, 2025
Assessing differential cell composition in single-cell studies using voomCLRAlemu Takele Assefa, Bie Verbist, Koen Van den Berge
Methods in Molecular Biology (Clifton, N.J.)|December 10, 2022
A Guide to Trajectory Inference and RNA VelocityPhilipp Weiler, Koen Van den Berge, Kelly Street, et al.
F1000Research|February 13, 2023
<i>satuRn</i>: Scalable analysis of differential transcript usage for bulk and single-cell RNA-sequencing applicationsJeroen Gilis, Kristoffer Vitting-Seerup, Koen Van den Berge, et al.
Genome Biology|August 9, 2017
stageR: a general stage-wise method for controlling the gene-level false discovery rate in differential expression and differential transcript usageKoen Van den Berge, Charlotte Soneson, Mark D Robinson, et al.
Animals : an Open Access Journal From MDPI|April 12, 2022
Prevalence of Fox Tapeworm in Invasive Muskrats in Flanders (North Belgium)Emma Cartuyvels, Tim Adriaens, Kristof Baert, et al.
Nature Communications|January 27, 2024
Trajectory inference across multiple conditions with condimentsHector Roux de Bézieux, Koen Van den Berge, Kelly Street, et al.
NAR Genomics and Bioinformatics|December 10, 2025
Removal of unwanted variation in pseudobulk analysis of single-cell RNA sequencing data and the leveraging of pseudoreplicatesSofía Prieto León, Ewoud De Troyer, Helena Geys, et al.
International Journal of Molecular Sciences|January 26, 2021
Altering the Sex Pheromone Cyclo(l-Pro-l-Pro) of the Diatom <i>Seminavis robusta</i> towards a Chemical ProbeEli Bonneure, Amber De Baets, Sam De Decker, et al.
Biorxiv : the Preprint Server for Biology|January 8, 2024
Differential detection workflows for multi-sample single-cell RNA-seq dataJeroen Gilis, Laura Perin, Milan Malfait, et al.
Cell Reports Methods|December 1, 2022
Normalization benchmark of ATAC-seq datasets shows the importance of accounting for GC-content effectsKoen Van den Berge, Hsin-Jung Chou, Hector Roux de Bézieux, et al.
Pageof 4

Showing results (1-10 of 31) with videos related to

Sort By:
Pageof 4
Bioinformatics (Oxford, England)|November 23, 2025
Assessing differential cell composition in single-cell studies using voomCLRAlemu Takele Assefa, Bie Verbist, Koen Van den Berge
Methods in Molecular Biology (Clifton, N.J.)|December 10, 2022
A Guide to Trajectory Inference and RNA VelocityPhilipp Weiler, Koen Van den Berge, Kelly Street, et al.
F1000Research|February 13, 2023
<i>satuRn</i>: Scalable analysis of differential transcript usage for bulk and single-cell RNA-sequencing applicationsJeroen Gilis, Kristoffer Vitting-Seerup, Koen Van den Berge, et al.
Genome Biology|August 9, 2017
stageR: a general stage-wise method for controlling the gene-level false discovery rate in differential expression and differential transcript usageKoen Van den Berge, Charlotte Soneson, Mark D Robinson, et al.
Animals : an Open Access Journal From MDPI|April 12, 2022
Prevalence of Fox Tapeworm in Invasive Muskrats in Flanders (North Belgium)Emma Cartuyvels, Tim Adriaens, Kristof Baert, et al.
Nature Communications|January 27, 2024
Trajectory inference across multiple conditions with condimentsHector Roux de Bézieux, Koen Van den Berge, Kelly Street, et al.
NAR Genomics and Bioinformatics|December 10, 2025
Removal of unwanted variation in pseudobulk analysis of single-cell RNA sequencing data and the leveraging of pseudoreplicatesSofía Prieto León, Ewoud De Troyer, Helena Geys, et al.
International Journal of Molecular Sciences|January 26, 2021
Altering the Sex Pheromone Cyclo(l-Pro-l-Pro) of the Diatom <i>Seminavis robusta</i> towards a Chemical ProbeEli Bonneure, Amber De Baets, Sam De Decker, et al.
Biorxiv : the Preprint Server for Biology|January 8, 2024
Differential detection workflows for multi-sample single-cell RNA-seq dataJeroen Gilis, Laura Perin, Milan Malfait, et al.
Cell Reports Methods|December 1, 2022
Normalization benchmark of ATAC-seq datasets shows the importance of accounting for GC-content effectsKoen Van den Berge, Hsin-Jung Chou, Hector Roux de Bézieux, et al.
Pageof 4