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Plos Computational Biology|July 26, 2017
MrTADFinder: A network modularity based approach to identify topologically associating domains in multiple resolutionsKoon-Kiu Yan, Shaoke Lou, Mark GersteinPlos One|May 24, 2011
The spread of scientific information: insights from the web usage statistics in PLoS article-level metricsKoon-Kiu Yan, Mark GersteinCell Systems|March 28, 2020
Comparing Technological Development and Biological Evolution from a Network PerspectiveKoon-Kiu Yan, Daifeng Wang, Kun Xiong, et al.BMC Bioinformatics|May 31, 2020
The corrected gene proximity map for analyzing the 3D genome organization using Hi-C dataCheng Ye, Alberto Paccanaro, Mark Gerstein, et al.Trends in Genetics : TIG|March 24, 2016
Temporal Dynamics of Collaborative Networks in Large Scientific ConsortiaDaifeng Wang, Koon-Kiu Yan, Joel Rozowsky, et al.Plos One|February 4, 2010
Improved reconstruction of in silico gene regulatory networks by integrating knockout and perturbation dataKevin Y Yip, Roger P Alexander, Koon-Kiu Yan, et al.Proceedings of the National Academy of Sciences of the United States of America|May 5, 2010
Comparing genomes to computer operating systems in terms of the topology and evolution of their regulatory control networksKoon-Kiu Yan, Gang Fang, Nitin Bhardwaj, et al.Bioinformatics (Oxford, England)|April 1, 2021
Gene Tracer: a smart, interactive, voice-controlled Alexa skill For gene information retrieval and browsing, mutation annotation and network visualizationShaoke Lou, Tianxiao Li, Jason Liu, et al.Genome Biology|September 25, 2014
OrthoClust: an orthology-based network framework for clustering data across multiple speciesKoon-Kiu Yan, Daifeng Wang, Joel Rozowsky, et al.Bioinformatics (Oxford, England)|April 4, 2017
HiC-spector: a matrix library for spectral and reproducibility analysis of Hi-C contact mapsKoon-Kiu Yan, Galip Gürkan Yardimci, Chengfei Yan, et al.Pageof 45