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Computational and Structural Biotechnology Journal|December 17, 2016
Bioinformatics strategies for taxonomy independent binning and visualization of sequences in shotgun metagenomicsKarel Sedlar, Kristyna Kupkova, Ivo ProvaznikClinical Epigenetics|September 27, 2021
Histone H3 lysine 27 acetylation profile undergoes two global shifts in undernourished children and suggests altered one-carbon metabolismKristyna Kupkova, Savera J Shetty, Rashidul Haque, et al.The EMBO Journal|April 2, 2024
Genome-scale chromatin binding dynamics of RNA Polymerase II general transcription machinery componentsKristyna Kupkova, Savera J Shetty, Elizabeth A Hoffman, et al.Biorxiv : the Preprint Server for Biology|August 7, 2023
Genome-scale chromatin interaction dynamic measurements for key components of the RNA Pol II general transcription machineryKristyna Kupkova, Savera J Shetty, Elizabeth A Hoffman, et al.BMC Genomics|May 31, 2018
Transcription profiling of butanol producer Clostridium beijerinckii NRRL B-598 using RNA-SeqKarel Sedlar, Pavlina Koscova, Maryna Vasylkivska, et al.JCEM Case Reports|November 21, 2025
Osteoporosis Associated with <i>SCN8A</i> MutationDaniyeh Khurram, Kristyna Kupkova, Larry D Mesner, et al.Clinical Epigenetics|August 11, 2023
Globally elevated levels of histone H3 lysine 9 trimethylation in early infancy are associated with poor growth trajectory in Bangladeshi childrenKristyna Kupkova, Savera J Shetty, Marilyn G Pray-Grant, et al.Biological Psychiatry Global Open Science|October 26, 2023
Transcriptional Profile of Exercise-Induced Protection Against Relapse to Cocaine Seeking in a Rat ModelEleanor Blair Towers, Daniel A Shapiro, Jean M Abel, et al.BMC Genomics|April 13, 2022
GenomicDistributions: fast analysis of genomic intervals with BioconductorKristyna Kupkova, Jose Verdezoto Mosquera, Jason P Smith, et al.Biorxiv : the Preprint Server for Biology|February 27, 2026
Identification of target genes and regulatory networks for bone mineral density GWAS loci through systematic targeting and inhibitionMohammadjavad Kahlani, Larry Mesner, Vedavathi Madhu, et al.Pageof 2