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Plos Computational Biology|September 22, 2011
A detailed history of intron-rich eukaryotic ancestors inferred from a global survey of 100 complete genomesMiklos Csuros, Igor B Rogozin, Eugene V KooninMethods in Molecular Biology (Clifton, N.J.)|March 9, 2012
Genome-wide comparative analysis of phylogenetic trees: the prokaryotic forest of lifePere Puigbò, Yuri I Wolf, Eugene V KooninBMC Evolutionary Biology|November 26, 2014
MitoCOGs: clusters of orthologous genes from mitochondria and implications for the evolution of eukaryotesSivakumar Kannan, Igor B Rogozin, Eugene V KooninProteins|March 29, 2001
Adaptations of the helix-grip fold for ligand binding and catalysis in the START domain superfamilyL M Iyer, E V Koonin, L AravindAnnual Review of Microbiology|September 7, 2001
Horizontal gene transfer in prokaryotes: quantification and classificationE V Koonin, K S Makarova, L AravindGenetics|May 3, 2001
Saccharomyces cerevisiae SMT4 encodes an evolutionarily conserved protease with a role in chromosome condensation regulationA V Strunnikov, L Aravind, E V KooninCurrent Opinion in Structural Biology|May 9, 2006
Comparative genomics and structural biology of the molecular innovations of eukaryotesL Aravind, Lakshminarayan M Iyer, Eugene V KooninThe Journal of Biological Chemistry|June 9, 1995
Identification of the primase active site of the herpes simplex virus type 1 helicase-primaseS Dracheva, E V Koonin, J J CruteVirology|July 22, 2014
Origin of giant viruses from smaller DNA viruses not from a fourth domain of cellular lifeNatalya Yutin, Yuri I Wolf, Eugene V KooninBiology Direct|July 12, 2014
Impairment of translation in neurons as a putative causative factor for autismEugenia Poliakov, Eugene V Koonin, Igor B RogozinPageof 20,701