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Bioinformatics (Oxford, England)|June 27, 2019
Pygenprop: a Python library for programmatic exploration and comparison of organism genome propertiesLee H Bergstrand, Josh D Neufeld, Andrew C DoxeyMsystems|August 2, 2017
The Skin Microbiome of Cohabiting CouplesAshley A Ross, Andrew C Doxey, Josh D NeufeldBMC Biology|November 7, 2015
MetAnnotate: function-specific taxonomic profiling and comparison of metagenomesPavel Petrenko, Briallen Lobb, Daniel A Kurtz, et al.The ISME Journal|September 8, 2019
Metagenomic and chemical characterization of soil cobalamin productionXinda Lu, Katherine R Heal, Anitra E Ingalls, et al.The ISME Journal|August 16, 2014
Aquatic metagenomes implicate Thaumarchaeota in global cobalamin productionAndrew C Doxey, Daniel A Kurtz, Michael D J Lynch, et al.ISME Communications|March 19, 2024
Evaluation of multiple displacement amplification for metagenomic analysis of low biomass samplesMelody Cabrera Ospino, Katja Engel, Santiago Ruiz-Navas, et al.Environmental Microbiology|December 13, 2016
Agricultural soil denitrifiers possess extensive nitrite reductase gene diversitySara Coyotzi, Andrew C Doxey, Ian D Clark, et al.Plos One|March 9, 2017
Functional metagenomics reveals novel β-galactosidases not predictable from gene sequencesJiujun Cheng, Tatyana Romantsov, Katja Engel, et al.The ISME Journal|April 26, 2020
High functional diversity among Nitrospira populations that dominate rotating biological contactor microbial communities in a municipal wastewater treatment plantEmilie Spasov, Jackson M Tsuji, Laura A Hug, et al.Briefings in Bioinformatics|May 15, 2024
AnnoView enables large-scale analysis, comparison, and visualization of microbial gene neighborhoodsXin Wei, Huagang Tan, Briallen Lobb, et al.Pageof 20