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Journal of Proteome Research|December 5, 2018
msCRUSH: Fast Tandem Mass Spectral Clustering Using Locality Sensitive HashingLei Wang, Sujun Li, Haixu TangProteomics|May 17, 2020
A Fast and Memory-Efficient Spectral Library Search Algorithm Using Locality-Sensitive HashingLei Wang, Kaiyuan Liu, Sujun Li, et al.Advances in Experimental Medicine and Biology|November 4, 2016
Computational Methods in Mass Spectrometry-Based ProteomicsSujun Li, Haixu TangAnalytical Chemistry|February 14, 2020
Full-Spectrum Prediction of Peptides Tandem Mass Spectra using Deep Neural NetworkKaiyuan Liu, Sujun Li, Lei Wang, et al.Molecular & Cellular Proteomics : MCP|May 31, 2019
A Meta-proteogenomic Approach to Peptide Identification Incorporating Assembly Uncertainty and Genomic VariationSujun Li, Haixu Tang, Yuzhen YePlos Computational Biology|December 6, 2016
A Graph-Centric Approach for Metagenome-Guided Peptide and Protein Identification in MetaproteomicsHaixu Tang, Sujun Li, Yuzhen YeResearch in Computational Molecular Biology : ... Annual International Conference, RECOMB ... : Proceedings. RECOMB (Conference : 2005- )|December 11, 2019
Constrained <i>De Novo</i> Sequencing of neo-Epitope Peptides using Tandem Mass SpectrometrySujun Li, Alex DeCourcy, Haixu TangAMIA Joint Summits on Translational Science Proceedings. AMIA Joint Summits on Translational Science|September 6, 2016
On the privacy risks of sharing clinical proteomics dataSujun Li, Nuno Bandeira, Xiaofeng Wang, et al.Nature Communications|December 2, 2023
Accurate de novo peptide sequencing using fully convolutional neural networksKaiyuan Liu, Yuzhen Ye, Sujun Li, et al.Nature Communications|December 12, 2025
FIDDLE: a deep learning method for chemical formulas prediction from tandem mass spectraYuhui Hong, Sujun Li, Yuzhen Ye, et al.Pageof 1,998