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Bioinformatics (Oxford, England)|September 20, 2022
3CAC: improving the classification of phages and plasmids in metagenomic assemblies using assembly graphsLianrong Pu, Ron ShamirNucleic Acids Research|September 17, 2024
4CAC: 4-class classifier of metagenome contigs using machine learning and assembly graphsLianrong Pu, Ron ShamirGenome Research|August 9, 2023
Efficient minimizer orders for large values of k using minimum decycling setsDavid Pellow, Lianrong Pu, Bariş Ekim, et al.Nature Reviews. Molecular Cell Biology|September 18, 2008
Modelling and analysis of gene regulatory networksGuy Karlebach, Ron ShamirComputational Systems Bioinformatics. Computational Systems Bioinformatics Conference|August 1, 2009
Detecting pathways transcriptionally correlated with clinical parametersIgor Ulitsky, Ron ShamirMolecular Systems Biology|August 30, 2019
Inaccuracy of the log-rank approximation in cancer data analysisNimrod Rappoport, Ron ShamirProceedings of the National Academy of Sciences of the United States of America|December 24, 2004
GERBIL: Genotype resolution and block identification using likelihoodGad Kimmel, Ron ShamirBioinformatics (Oxford, England)|May 5, 2018
Sorting cancer karyotypes using double-cut-and-joins, duplications and deletionsRon Zeira, Ron ShamirBMC Systems Biology|April 6, 2007
Identification of functional modules using network topology and high-throughput dataIgor Ulitsky, Ron ShamirMethods in Molecular Biology (Clifton, N.J.)|October 24, 2007
Degenerate primer design: theoretical analysis and the HYDEN programChaim Linhart, Ron ShamirPageof 20