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Journal of Physics. Conference Series|January 8, 2019
Challenges and opportunities in connecting simulations with experiments via molecular dynamics of cellular environmentsMichael Feig, Grzegorz Nawrocki, Isseki Yu, et al.Proteins|September 19, 2007
Sampling of near-native protein conformations during protein structure refinement using a coarse-grained model, normal modes, and molecular dynamics simulationsAndrew W Stumpff-Kane, Katarzyna Maksimiak, Michael S Lee, et al.IEEE/ACM Transactions on Computational Biology and Bioinformatics|October 26, 2011
Molecular dynamics trajectory compression with a coarse-grained modelYi-Ming Cheng, Srinivasa Murthy Gopal, Sean M Law, et al.Plos Computational Biology|March 22, 2023
Characterization of RNA polymerase II trigger loop mutations using molecular dynamics simulations and machine learningBercem Dutagaci, Bingbing Duan, Chenxi Qiu, et al.The Journal of Physical Chemistry. B|November 28, 2022
Molecular Dynamics Simulations of Rhodamine B Zwitterion Diffusion in Polyelectrolyte SolutionsPeter K Walhout, Zhe He, Bercem Dutagaci, et al.The Journal of Physical Chemistry. B|October 6, 2016
Intrinsic Base-Pair Rearrangement in the Hairpin Ribozyme Directs RNA Conformational Sampling and Tertiary Interface FormationPatrick O Ochieng, Neil A White, Michael Feig, et al.The Journal of Physical Chemistry. B|August 29, 2014
Conformational preferences of DNA in reduced dielectric environmentsAsli Yildirim, Monika Sharma, Bradley Michael Varner, et al.Journal of Molecular Biology|December 14, 2004
The requirement for mechanical coupling between head and S2 domains in smooth muscle myosin ATPase regulation and its implications for dimeric motor functionFlorence Tama, Michael Feig, Jun Liu, et al.Journal of Molecular Graphics & Modelling|March 14, 2015
Complete atomistic model of a bacterial cytoplasm for integrating physics, biochemistry, and systems biologyMichael Feig, Ryuhei Harada, Takaharu Mori, et al.Biochemistry|March 5, 2025
Controlled Enzyme Cargo Loading in Engineered Bacterial Microcompartment ShellsNicholas M Tefft, Yali Wang, Alexander Jussupow, et al.Pageof 19