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Journal of Chemical Information and Modeling|April 30, 2026
HLABrew for Human Leukocyte Antigen Class I-Presented Epitope Recognition and Mimotope DiscoveryJiani Ma, Yumeng Zhang, Lin Zhang, et al.
Briefings in Bioinformatics|July 7, 2025
pMHChat, characterizing the interactions between major histocompatibility complex class II molecules and peptides with large language models and deep hypergraph learningJiani Ma, Zhikang Wang, Cen Tong, et al.
BMC Bioinformatics|March 25, 2021
m7GDisAI: N7-methylguanosine (m7G) sites and diseases associations inference based on heterogeneous networkJiani Ma, Lin Zhang, Jin Chen, et al.
Bioinformatics (Oxford, England)|August 23, 2023
MULGA, a unified multi-view graph autoencoder-based approach for identifying drug-protein interaction and drug repositioningJiani Ma, Chen Li, Yiwen Zhang, et al.
Plos Computational Biology|April 4, 2024
DBDNMF: A Dual Branch Deep Neural Matrix Factorization method for drug response predictionHui Liu, Feng Wang, Jian Yu, et al.
Physical Chemistry Chemical Physics : PCCP|July 10, 2025
Mechanistic investigations of photochemical generation of quinone methidesLingfeng Ge, Yan Guo, Shu-Lin Zhang, et al.
Methods in Molecular Biology (Clifton, N.J.)|June 22, 2024
Biclustering for Epi-Transcriptomic Co-functional AnalysisShutao Chen, Lin Zhang, Hui Liu
The Journal of Physical Chemistry Letters|December 26, 2025
Deciphering Carbene Reactivity: Ultrafast Spectroscopy and Computational Insights into Photochemical Heterocycle FormationYinjiao Zhao, Yang Cheng, Shu-Lin Zhang, et al.
JACS Au|December 26, 2025
Photoinduced Alcohol and Ketone Generation from Alkoxyaroylsilanes: Mechanistic Insights into Competing Radical PathwaysYang Cheng, Shu-Lin Zhang, Jessika Lammert, et al.
Plos One|October 6, 2015
lncRScan-SVM: A Tool for Predicting Long Non-Coding RNAs Using Support Vector MachineLei Sun, Hui Liu, Lin Zhang, et al.
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