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Computational and Structural Biotechnology Journal|October 13, 2025
Structure-filtered search of enzyme variantsLinda Porri, Sandra Castillo, Paula JouhtenProgress in Molecular and Subcellular Biology|March 27, 2019
Yeast Genome-Scale Metabolic Models for Simulating Genotype-Phenotype RelationsSandra Castillo, Kiran Raosaheb Patil, Paula JouhtenBMC Bioinformatics|November 22, 2023
Genome-scale metabolic models reveal determinants of phenotypic differences in non-Saccharomyces yeastsJakob P Pettersen, Sandra Castillo, Paula Jouhten, et al.Plos Computational Biology|March 19, 2026
PHA synthase variant design using a conditional variational autoencoderTuula Tenkanen, Anna Ylinen, Paula Jouhten, et al.Frontiers in Microbiology|July 7, 2018
Enhanced Triacylglycerol Production With Genetically Modified Trichosporon oleaginosusKari Koivuranta, Sandra Castillo, Paula Jouhten, et al.Computational and Structural Biotechnology Journal|April 2, 2014
Metabolic modelling in the development of cell factories by synthetic biologyPaula JouhtenMetabolic Engineering Communications|December 11, 2025
Model-guided chemical environment and metabolic network design to couple pathways with cell fitnessNatalia Kakko von Koch, Tuula Tenkanen, Sandra Castillo, et al.Methods in Molecular Biology (Clifton, N.J.)|September 3, 2014
Labelling analysis for ¹³C MFA using NMR spectroscopyPaula Jouhten, Hannu MaaheimoThe FEBS Journal|June 8, 2012
Dynamic flux balance analysis of the metabolism of Saccharomyces cerevisiae during the shift from fully respirative or respirofermentative metabolic states to anaerobiosisPaula Jouhten, Marilyn Wiebe, Merja PenttiläBMC Systems Biology|October 31, 2009
Inferring branching pathways in genome-scale metabolic networksEsa Pitkänen, Paula Jouhten, Juho RousuPageof 10