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Nature|December 18, 2015
Rational design of α-helical tandem repeat proteins with closed architecturesLindsey Doyle, Jazmine Hallinan, Jill Bolduc, et al.Protein Engineering, Design & Selection : PEDS|December 20, 2018
Unintended specificity of an engineered ligand-binding protein facilitated by unpredicted plasticity of the protein foldAustin L Day, Per Greisen, Lindsey Doyle, et al.Protein Science : a Publication of the Protein Society|October 6, 2017
Sampling and energy evaluation challenges in ligand binding protein designJiayi Dou, Lindsey Doyle, Per Jr Greisen, et al.Nucleic Acids Research|November 6, 2018
Structure, subunit organization and behavior of the asymmetric Type IIT restriction endonuclease BbvCIBetty W Shen, Lindsey Doyle, Phil Bradley, et al.Nucleic Acids Research|September 11, 2009
High-resolution profiling of homing endonuclease binding and catalytic specificity using yeast surface displayJordan Jarjour, Hoku West-Foyle, Michael T Certo, et al.Elife|December 10, 2015
Precise assembly of complex beta sheet topologies from de novo designed building blocksIndigo Chris King, James Gleixner, Lindsey Doyle, et al.Nature|September 6, 2013
Computational design of ligand-binding proteins with high affinity and selectivityChristine E Tinberg, Sagar D Khare, Jiayi Dou, et al.Science (New York, N.Y.)|March 8, 2008
De novo computational design of retro-aldol enzymesLin Jiang, Eric A Althoff, Fernando R Clemente, et al.Journal of Chemical Information and Modeling|October 1, 2015
CSAR Benchmark Exercise 2013: Evaluation of Results from a Combined Computational Protein Design, Docking, and Scoring/Ranking ChallengeRichard D Smith, Kelly L Damm-Ganamet, James B Dunbar, et al.Pageof 1