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BMC Bioinformatics|August 19, 2006
Incorporating background frequency improves entropy-based residue conservation measuresKai Wang, Ram SamudralaTrends in Biotechnology|February 6, 2004
Enhanced functional information from predicted protein networksJason McDermott, Ram SamudralaBioorganic & Medicinal Chemistry Letters|November 1, 2003
Identifying inhibitors of the SARS coronavirus proteinaseEkachai Jenwitheesuk, Ram SamudralaBioinformatics (Oxford, England)|September 7, 2007
Identification of potential HIV-1 targets of minocyclineEkachai Jenwitheesuk, Ram SamudralaBMC Structural Biology|August 2, 2002
A comprehensive analysis of 40 blind protein structure predictionsRam Samudrala, Michael LevittBMC Structural Biology|April 5, 2003
Improved prediction of HIV-1 protease-inhibitor binding energies by molecular dynamics simulationsEkachai Jenwitheesuk, Ram SamudralaACS Omega|October 29, 2019
Fingerprinting CANDO: Increased Accuracy with Structure- and Ligand-Based Shotgun Drug RepurposingJames Schuler, Ram SamudralaAIDS (London, England)|March 15, 2005
Virtual screening of HIV-1 protease inhibitors against human cytomegalovirus protease using docking and molecular dynamicsEkachai Jenwitheesuk, Ram SamudralaBioinformatics (Oxford, England)|April 30, 2005
FSSA: a novel method for identifying functional signatures from structural alignmentsKai Wang, Ram SamudralaAntiviral Therapy|March 9, 2005
Prediction of HIV-1 protease inhibitor resistance using a protein-inhibitor flexible docking approachEkachai Jenwitheesuk, Ram SamudralaPageof 15