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Computational and Structural Biotechnology Journal|December 9, 2020
Biomarker discovery for predicting spontaneous preterm birth from gene expression data by regularized logistic regressionLingyu Li, Zhi-Ping LiuJournal of Translational Medicine|December 21, 2021
Detecting prognostic biomarkers of breast cancer by regularized Cox proportional hazards modelsLingyu Li, Zhi-Ping LiuBioengineering (Basel, Switzerland)|August 25, 2022
scGENA: A Single-Cell Gene Coexpression Network Analysis Framework for Clustering Cell Types and Revealing Biological MechanismsYousif A Algabri, Lingyu Li, Zhi-Ping LiuComputational Biology and Chemistry|August 6, 2022
Robust biomarker screening from gene expression data by stable machine learning-recursive feature elimination methodsLingyu Li, Wai-Ki Ching, Zhi-Ping LiuIEEE Transactions on Computational Biology and Bioinformatics|August 14, 2025
NetWalkRank: Cancer Driver Gene Prioritization in Multiplex Gene Regulatory Networks by a Random Walk ApproachFatemeh Keikha, Lingyu Li, Wai-Ki Ching, et al.NPJ Digital Medicine|May 25, 2026
CNet-Cox for interpretable network biomarker discovery and survival risk scoring in precise breast cancer prognosisLingyu Li, Weiqin Zhao, Qingpeng Zhang, et al.Bioinformatics (Oxford, England)|April 20, 2023
LogBTF: gene regulatory network inference using Boolean threshold network model from single-cell gene expression dataLingyu Li, Liangjie Sun, Guangyi Chen, et al.Biomarkers in Medicine|January 21, 2016
Identifying network-based biomarkers of complex diseases from high-throughput dataZhi-Ping LiuCurrent Genomics|May 5, 2015
Reverse Engineering of Genome-wide Gene Regulatory Networks from Gene Expression DataZhi-Ping LiuFrontiers in Genetics|July 29, 2017
Quantifying Gene Regulatory Relationships with Association Measures: A Comparative StudyZhi-Ping LiuPageof 56