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Communications Biology|June 8, 2026
Large language model consensus substantially improves the cell type annotation accuracy for scRNA-seq dataChen Yang, Xianyang Zhang, Jun ChenBiorxiv : the Preprint Server for Biology|April 10, 2026
Intercellular communication is a heritable dimension of human tissue architectureChen Yang, Xianyang Zhang, Jun ChenAnnals of Statistics|May 4, 2023
OPTIMAL FALSE DISCOVERY RATE CONTROL FOR LARGE SCALE MULTIPLE TESTING WITH AUXILIARY INFORMATIONHongyuan Cao, Jun Chen, Xianyang ZhangBiorxiv : the Preprint Server for Biology|March 27, 2026
Frequency-domain kernels enable atlas-scale detection of spatially variable genesChen Yang, Xianyang Zhang, Jun ChenBiometrika|November 22, 2021
Covariate adaptive familywise error rate control for genome-wide association studiesHuijuan Zhou, Xianyang Zhang, Jun ChenBiorxiv : the Preprint Server for Biology|January 9, 2026
FlashDeconv enables atlas-scale, multi-resolution spatial deconvolution via structure-preserving sketchingChen Yang, Xianyang Zhang, Jun ChenBiorxiv : the Preprint Server for Biology|June 4, 2025
BMDD: A Probabilistic Framework for Accurate Imputation of Zero-inflated Microbiome Sequencing DataHuijuan Zhou, Jun Chen, Xianyang ZhangPlos Computational Biology|October 24, 2025
BMDD: A probabilistic framework for accurate imputation of zero-inflated microbiome sequencing dataHuijuan Zhou, Jun Chen, Xianyang ZhangBiorxiv : the Preprint Server for Biology|March 27, 2026
ChatSpatial: Schema-Enforced Agentic Orchestration for Reproducible and Cross-Platform Spatial TranscriptomicsChen Yang, Xianyang Zhang, Jun ChenBioinformatics (Oxford, England)|September 9, 2023
A general framework for powerful confounder adjustment in omics association studiesAsmita Roy, Jun Chen, Xianyang ZhangPageof 8