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Methods in Molecular Biology (Clifton, N.J.)|July 8, 2021
Databases for Protein-Protein InteractionsNatsu Nakajima, Tatsuya Akutsu, Ryuichiro NakatoJournal of Cheminformatics|June 24, 2014
Efficient enumeration of monocyclic chemical graphs with given path frequenciesMasaki Suzuki, Hiroshi Nagamochi, Tatsuya AkutsuThescientificworldjournal|June 6, 2013
Survival analysis by penalized regression and matrix factorizationYeuntyng Lai, Morihiro Hayashida, Tatsuya AkutsuComputational and Structural Biotechnology Journal|June 25, 2015
Computational Methods for Modification of Metabolic NetworksTakeyuki Tamura, Wei Lu, Tatsuya AkutsuBMC Bioinformatics|November 27, 2016
LBSizeCleav: improved support vector machine (SVM)-based prediction of Dicer cleavage sites using loop/bulge lengthYu Bao, Morihiro Hayashida, Tatsuya AkutsuIEEE/ACM Transactions on Computational Biology and Bioinformatics|January 24, 2017
Enumerating Substituted Benzene Isomers of Tree-Like Chemical GraphsJinghui Li, Hiroshi Nagamochi, Tatsuya AkutsuBMC Bioinformatics|February 12, 2009
Prediction of RNA secondary structure with pseudoknots using integer programmingUnyanee Poolsap, Yuki Kato, Tatsuya AkutsuBMC Bioinformatics|March 1, 2012
Enumerating tree-like chemical graphs with given upper and lower bounds on path frequenciesMasaaki Shimizu, Hiroshi Nagamochi, Tatsuya AkutsuJournal of Computational Biology : a Journal of Computational Molecular Cell Biology|February 15, 2020
Comparison of Pseudoknotted RNA Secondary Structures by Topological Centroid Identification and Tree Edit DistanceFeiqi Wang, Tatsuya Akutsu, Tomoya MoriBMC Bioinformatics|December 22, 2010
Integer programming-based method for grammar-based tree compression and its application to pattern extraction of glycan tree structuresYang Zhao, Morihiro Hayashida, Tatsuya AkutsuPageof 26