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Bioinformatics (Oxford, England)|January 31, 2004
Optimizing substitution matrices by separating score distributionsYuichiro Hourai, Tatsuya Akutsu, Yutaka AkiyamaGenome Informatics. International Conference on Genome Informatics|December 20, 2005
A Gibbs sampling approach to detection of tree motifsLidio Marx Carvalho Meireles, Tatsuya AkutsuPacific Symposium on Biocomputing. Pacific Symposium on Biocomputing|November 13, 2009
Dynamic programming algorithms for RNA structure prediction with binding sitesUnyanee Poolsap, Yuki Kato, Tatsuya AkutsuJournal of Computational Biology : a Journal of Computational Molecular Cell Biology|June 28, 2016
Enumeration Method for Structural Isomers Containing User-Defined Structures Based on Breadth-First Search ApproachJira Jindalertudomdee, Morihiro Hayashida, Tatsuya AkutsuJournal of Computational Biology : a Journal of Computational Molecular Cell Biology|July 8, 2009
Dynamic programming algorithms and grammatical modeling for protein beta-sheet predictionYuki Kato, Tatsuya Akutsu, Hiroyuki SekiMethods in Molecular Biology (Clifton, N.J.)|January 27, 2023
Metrics for RNA Secondary Structure ComparisonFeiqi Wang, Tatsuya Akutsu, Tomoya MoriPlos One|April 15, 2009
A mathematical model for the detection mechanism of DNA double-strand breaks depending on autophosphorylation of ATMKazunari Mouri, Jose C Nacher, Tatsuya AkutsuIEEE Transactions on Cybernetics|February 26, 2026
On the Number of Control Nodes in Boolean Networks With Degree ConstraintsLiangjie Sun, Wai-Ki Ching, Tatsuya AkutsuScientific Reports|July 23, 2024
Target control of linear directed networks based on the path cover problemWataru Someya, Tatsuya Akutsu, Jose C NacherIEEE/ACM Transactions on Computational Biology and Bioinformatics|October 5, 2020
An FVS-Based Approach to Attractor Detection in Asynchronous Random Boolean NetworksTrinh Van Giang, Tatsuya Akutsu, Kunihiko HiraishiPageof 26