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Methods in Molecular Biology (Clifton, N.J.)|September 10, 2010
Regulating the regulators: modulators of transcription factor activityLogan Everett, Matthew Hansen, Sridhar Hannenhalli
Nucleic Acids Research|October 18, 2008
PTM-Switchboard--a database of posttranslational modifications of transcription factors, the mediating enzymes and target genesLogan Everett, Antony Vo, Sridhar Hannenhalli
Bioinformatics (Oxford, England)|July 29, 2006
Dense subgraph computation via stochastic search: application to detect transcriptional modulesLogan Everett, Li-San Wang, Sridhar Hannenhalli
Algorithms for Molecular Biology : AMB|January 6, 2010
Mimosa: mixture model of co-expression to detect modulators of regulatory interactionMatthew Hansen, Logan Everett, Larry Singh, et al.
Genetic Engineering|December 13, 2006
Paired-end genomic signature tags: a method for the functional analysis of genomes and epigenomesJohn J Dunn, Sean R McCorkle, Logan Everett, et al.
Chemico-Biological Interactions|April 3, 2024
A 50-gene biomarker identifies estrogen receptor-modulating chemicals in a microarray compendiumJ Christopher Corton, Geronimo Matteo, Brian Chorley, et al.
Nucleic Acids Research|October 15, 2013
CTCF binding site sequence differences are associated with unique regulatory and functional trends during embryonic stem cell differentiationRobert N Plasschaert, Sébastien Vigneau, Italo Tempera, et al.
Toxicological Sciences : an Official Journal of the Society of Toxicology|September 19, 2025
Zebrafish cell lines and high-throughput transcriptomics: advancing in vitro and bioinformatics methods for supporting environmental risk assessmentPeter G Schumann, Joseph Bundy, Derik E Haggard, et al.
Regulatory Toxicology and Pharmacology : RTP|June 26, 2025
Comparison of whole transcriptome and targeted RNA sequencing for ecological high-throughput transcriptomicsDaniel L Villeneuve, Mackenzie Nash, Adam Biales, et al.
The Journals of Gerontology. Series A, Biological Sciences and Medical Sciences|June 15, 2019
Lisinopril Preserves Physical Resilience and Extends Life Span in a Genotype-Specific Manner in Drosophila melanogasterMariann M Gabrawy, Sarah Campbell, Mary Anna Carbone, et al.
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