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Biophysical Journal|October 19, 2011
GOAP: a generalized orientation-dependent, all-atom statistical potential for protein structure predictionHongyi Zhou, Jeffrey SkolnickThe Journal of Physical Chemistry. B|October 18, 2016
Why Is There a Glass Ceiling for Threading Based Protein Structure Prediction Methods?Jeffrey Skolnick, Hongyi ZhouThe Journal of Physical Chemistry. B|August 31, 2022
Implications of the Essential Role of Small Molecule Ligand Binding Pockets in Protein-Protein InteractionsJeffrey Skolnick, Hongyi ZhouBioinformatics (Oxford, England)|August 28, 2012
EFICAz2.5: application of a high-precision enzyme function predictor to 396 proteomesNarendra Kumar, Jeffrey SkolnickBioinformatics (Oxford, England)|July 31, 2025
AF3Complex yields improved structural predictions of protein complexesJonathan Feldman, Jeffrey SkolnickThe Journal of Physical Chemistry. B|May 24, 2024
Utility of the Morgan Fingerprint in Structure-Based Virtual Ligand ScreeningHongyi Zhou, Jeffrey SkolnickProteins|November 23, 2011
Template-based protein structure modeling using TASSER(VMT.)Hongyi Zhou, Jeffrey SkolnickProteins|March 3, 2011
New benchmark metrics for protein-protein docking methodsMu Gao, Jeffrey SkolnickMolecular Pharmaceutics|October 21, 2010
Cross-reactivity virtual profiling of the human kinome by X-react(KIN): a chemical systems biology approachMichal Brylinski, Jeffrey SkolnickPlos Computational Biology|April 4, 2009
From nonspecific DNA-protein encounter complexes to the prediction of DNA-protein interactionsMu Gao, Jeffrey SkolnickPageof 270