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BMC Bioinformatics
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October 26, 2023
Pan-genome de Bruijn graph using the bidirectional FM-index
Lore Depuydt, Luca Renders, Thomas Abeel, et al.
Bioinformatics (Oxford, England)
|
December 5, 2025
Columba: fast approximate pattern matching with optimized search schemes
Luca Renders, Lore Depuydt, Travis Gagie, et al.
Journal of Computational Biology : a Journal of Computational Molecular Cell Biology
|
September 30, 2024
Lossless Approximate Pattern Matching: Automated Design of Efficient Search Schemes
Luca Renders, Lore Depuydt, Sven Rahmann, et al.
Biorxiv : the Preprint Server for Biology
|
March 10, 2025
Run-length compressed metagenomic read classification with SMEM-finding and tagging
Lore Depuydt, Omar Y Ahmed, Jan Fostier, et al.
Iscience
|
January 7, 2026
Run-length compressed metagenomic read classification with SMEM-finding and tagging
Lore Depuydt, Omar Y Ahmed, Jan Fostier, et al.
Proceedings. Data Compression Conference
|
August 19, 2024
Faster Maximal Exact Matches with Lazy LCP Evaluation
Adrián Goga, Lore Depuydt, Nathaniel K Brown, et al.
Biorxiv : the Preprint Server for Biology
|
June 10, 2024
b-move: faster bidirectional character extensions in a run-length compressed index
Lore Depuydt, Luca Renders, Simon Van de Vyver, et al.
Algorithms for Molecular Biology : AMB
|
August 12, 2025
b-move: faster lossless approximate pattern matching in a run-length compressed index
Lore Depuydt, Luca Renders, Simon Van de Vyver, et al.
Research Square
|
November 28, 2024
b-move: Faster Lossless Approximate Pattern Matching in a Run-Length Compressed Index
Lore Depuydt, Luca Renders, Simon Van de Vyver, et al.
International Symposium on String Processing and Information Retrieval : SPIRE ... : Proceedings. SPIRE (Symposium)
|
December 15, 2025
KeBaB: <i>k</i>-mer based breaking for finding long MEMs
Nathaniel K Brown, Lore Depuydt, Mohsen Zakeri, et al.
Page
of 1
Search research articles
Search
Showing results (1-10 of 10) with videos related to
Sort By:
Page
of 1
BMC Bioinformatics
|
October 26, 2023
Pan-genome de Bruijn graph using the bidirectional FM-index
Lore Depuydt, Luca Renders, Thomas Abeel, et al.
Bioinformatics (Oxford, England)
|
December 5, 2025
Columba: fast approximate pattern matching with optimized search schemes
Luca Renders, Lore Depuydt, Travis Gagie, et al.
Journal of Computational Biology : a Journal of Computational Molecular Cell Biology
|
September 30, 2024
Lossless Approximate Pattern Matching: Automated Design of Efficient Search Schemes
Luca Renders, Lore Depuydt, Sven Rahmann, et al.
Biorxiv : the Preprint Server for Biology
|
March 10, 2025
Run-length compressed metagenomic read classification with SMEM-finding and tagging
Lore Depuydt, Omar Y Ahmed, Jan Fostier, et al.
Iscience
|
January 7, 2026
Run-length compressed metagenomic read classification with SMEM-finding and tagging
Lore Depuydt, Omar Y Ahmed, Jan Fostier, et al.
Proceedings. Data Compression Conference
|
August 19, 2024
Faster Maximal Exact Matches with Lazy LCP Evaluation
Adrián Goga, Lore Depuydt, Nathaniel K Brown, et al.
Biorxiv : the Preprint Server for Biology
|
June 10, 2024
b-move: faster bidirectional character extensions in a run-length compressed index
Lore Depuydt, Luca Renders, Simon Van de Vyver, et al.
Algorithms for Molecular Biology : AMB
|
August 12, 2025
b-move: faster lossless approximate pattern matching in a run-length compressed index
Lore Depuydt, Luca Renders, Simon Van de Vyver, et al.
Research Square
|
November 28, 2024
b-move: Faster Lossless Approximate Pattern Matching in a Run-Length Compressed Index
Lore Depuydt, Luca Renders, Simon Van de Vyver, et al.
International Symposium on String Processing and Information Retrieval : SPIRE ... : Proceedings. SPIRE (Symposium)
|
December 15, 2025
KeBaB: <i>k</i>-mer based breaking for finding long MEMs
Nathaniel K Brown, Lore Depuydt, Mohsen Zakeri, et al.
Page
of 1