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Biorxiv : the Preprint Server for Biology|August 1, 2026
Localized Rigidification and Allosteric Modulation Mechanisms of SARS-CoV-2 Spike Neutralization by Class 3 and Class 4 Antibodies at Atomic Resolution: An Integrated Computational Study of Binding, Dynamics, and AllosteryMohammed Alshahrani, Will Gatlin, Max Ludwick, et al.
Biorxiv : the Preprint Server for Biology|April 10, 2026
Frustration Landscapes of Broadly Neutralizing SARS-CoV-2 Spike Antibodies Targeting Conserved Epitopes Reveal Energetic Logic of Escape-Proof and Escape-Prone MechanismsMohammed Alshahrani, Will Gatlin, Max Ludwick, et al.
International Journal of Molecular Sciences|May 13, 2026
Mechanisms of Binding and Immune Escape Resistance for Broadly Neutralizing Antibodies Targeting Distinct Conserved SARS-CoV-2 Spike Epitopes: A Hierarchical Approach Integrating Mutational Profiling and Energy Landscape AnalysisMohammed Alshahrani, Will Gatlin, Max Ludwick, et al.
Biorxiv : the Preprint Server for Biology|March 26, 2026
Decoding the Allosteric Paradox: A Dual Framework Integrating AI Cofolding Models with Landscape-Guided Interpretable AI Framework of Ligand-Protein BindingVedant Parikh, Brandon Foley, Will Gatlin, et al.
Biorxiv : the Preprint Server for Biology|January 16, 2026
Protein Language Models and Structure-Based Machine Learning for Prediction of Allosteric Binding Sites in Protein Kinases: An Explainable AI Framework Grounded in Energy Landscape-Encoded FrustrationKamila Riedlová, Vít Škrhák, Will Gatlin, et al.
Biorxiv : the Preprint Server for Biology|March 26, 2026
Decoding Allosteric Grammar with Explainable AI Integrating Protein Language Models and Energy Landscape Analysis: Neutral Frustration at Allosteric Binding Sites Encodes Regulatory Versatility in Protein KinasesWill Gatlin, Max Ludwick, Lucas Turano, et al.
Journal of Chemical Theory and Computation|May 7, 2026
Predicting and Decoding Allosteric Binding Sites Using Protein Language Models and Structure-Based Machine Learning: An Energy Landscape-Guided Explainable AI FrameworkKamila Riedlová, Vít Škrhák, William G Gatlin, et al.
Protein Science : a Publication of the Protein Society|July 9, 2026
Decoding the allosteric grammar of protein kinases: A dual-stream framework integrating protein language models and energy landscape frustration analysisWill Gatlin, Max Ludwick, Lucas Turano, et al.
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