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Arxiv|June 3, 2024
An Update to the SBML Human-Readable Antimony LanguageLucian Smith, Herbert M Sauro
Briefings in Bioinformatics|August 15, 2020
Publishing reproducible dynamic kinetic modelsVeronica Porubsky, Lucian Smith, Herbert M Sauro
IEEE Transactions on Bio-Medical Engineering|July 9, 2020
Editorial Reproducibility of Computational ModelsHerbert M Sauro, Kiri Choi, Kyle Medley, et al.
Biorxiv : the Preprint Server for Biology|July 14, 2025
SBMLNetwork: a framework for standards-based visualization of biochemical modelsAdel Heydarabadipour, Lucian Smith, Joseph L Hellerstein, et al.
Biorxiv : the Preprint Server for Biology|April 17, 2026
Antimony 3: Extending human-readable model definitions for SBML Level 3 Core and PackagesAdel Heydarabadipour, Lucian Smith, Joseph L Hellerstein, et al.
Plos Computational Biology|September 22, 2025
SBMLNetwork: A framework for standards-based visualization of biochemical modelsAdel Heydarabadipour, Lucian Smith, Joseph L Hellerstein, et al.
Bioinformatics (Oxford, England)|December 8, 2022
libRoadRunner 2.0: a high performance SBML simulation and analysis libraryCiaran Welsh, Jin Xu, Lucian Smith, et al.
Biorxiv : the Preprint Server for Biology|May 15, 2024
Signal integration and integral feedback control with biochemical reaction networksSteven S Andrews, Michael Kochen, Lucian Smith, et al.
Bio Systems|July 28, 2018
Tellurium: An extensible python-based modeling environment for systems and synthetic biologyKiri Choi, J Kyle Medley, Matthias König, et al.
Methods in Molecular Biology (Clifton, N.J.)|April 22, 2009
Network dynamicsHerbert M Sauro
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