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Lydia Freddolino

Showing results (41-50 of 87) with videos related to

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Biorxiv : the Preprint Server for Biology|November 24, 2025
StoPred: Accurate Stoichiometry Prediction for Protein Complexes Using Protein Language Models and Graph AttentionQuancheng Liu, Chunxiang Peng, Wei Zheng, et al.
Methods in Molecular Biology (Clifton, N.J.)|July 19, 2024
High-Throughput Mapping of Chromosomal Conformations in E. coli Under Physiological Conditions Using Massively Multiplexed Mu TranspositionKhang Ho, Sonya K Royzenblat, Brady Wilkins, et al.
Methods in Molecular Biology (Clifton, N.J.)|August 28, 2025
Correction to: High-Throughput Mapping of Chromosomal Conformations in E. coli Under Physiological Conditions Using Massively Multiplexed Mu TranspositionKhang Ho, Sonya K Royzenblat, Brady Wilkins, et al.
The Journal of Physical Chemistry. B|September 24, 2010
Simulations of a protein crystal with a high resolution X-ray structure: evaluation of force fields and water modelsDavid S Cerutti, Lydia Freddolino, Robert E Duke, et al.
Biorxiv : the Preprint Server for Biology|January 23, 2024
Nucleoid-associated proteins shape the global protein occupancy and transcriptional landscape of a clinical isolate of <i>Vibrio cholerae</i>Yulduz Rakibova, Drew T Dunham, Kimberley D Seed, et al.
The Journal of Physical Chemistry. B|August 19, 2007
Assembly of lipids and proteins into lipoprotein particlesAmy Y Shih, Anton Arkhipov, Lydia Freddolino, et al.
Biorxiv : the Preprint Server for Biology|June 29, 2026
Whole-proteome structure/function prediction in Uropathogenic <i>E. coli</i> reveals previously missed host-microbe and microbe-phage interaction pathwaysChunxiang Peng, Henry Schreiber, Chengxin Zhang, et al.
Nature Methods|January 3, 2024
Improving deep learning protein monomer and complex structure prediction using DeepMSA2 with huge metagenomics dataWei Zheng, Qiqige Wuyun, Yang Li, et al.
Journal of Chemical Theory and Computation|January 31, 2009
Vulnerability in Popular Molecular Dynamics Packages Concerning Langevin and Andersen DynamicsDavid S Cerutti, Robert Duke, Lydia Freddolino, et al.
Nature Protocols|April 28, 2026
Profiling large-scale protein occupancy on bacterial genomes using IPOD-HRRebecca L Hurto, Jeremy W Schroeder, Julian Trouillon, et al.
Pageof 9

Showing results (41-50 of 87) with videos related to

Sort By:
Pageof 9
Biorxiv : the Preprint Server for Biology|November 24, 2025
StoPred: Accurate Stoichiometry Prediction for Protein Complexes Using Protein Language Models and Graph AttentionQuancheng Liu, Chunxiang Peng, Wei Zheng, et al.
Methods in Molecular Biology (Clifton, N.J.)|July 19, 2024
High-Throughput Mapping of Chromosomal Conformations in E. coli Under Physiological Conditions Using Massively Multiplexed Mu TranspositionKhang Ho, Sonya K Royzenblat, Brady Wilkins, et al.
Methods in Molecular Biology (Clifton, N.J.)|August 28, 2025
Correction to: High-Throughput Mapping of Chromosomal Conformations in E. coli Under Physiological Conditions Using Massively Multiplexed Mu TranspositionKhang Ho, Sonya K Royzenblat, Brady Wilkins, et al.
The Journal of Physical Chemistry. B|September 24, 2010
Simulations of a protein crystal with a high resolution X-ray structure: evaluation of force fields and water modelsDavid S Cerutti, Lydia Freddolino, Robert E Duke, et al.
Biorxiv : the Preprint Server for Biology|January 23, 2024
Nucleoid-associated proteins shape the global protein occupancy and transcriptional landscape of a clinical isolate of <i>Vibrio cholerae</i>Yulduz Rakibova, Drew T Dunham, Kimberley D Seed, et al.
The Journal of Physical Chemistry. B|August 19, 2007
Assembly of lipids and proteins into lipoprotein particlesAmy Y Shih, Anton Arkhipov, Lydia Freddolino, et al.
Biorxiv : the Preprint Server for Biology|June 29, 2026
Whole-proteome structure/function prediction in Uropathogenic <i>E. coli</i> reveals previously missed host-microbe and microbe-phage interaction pathwaysChunxiang Peng, Henry Schreiber, Chengxin Zhang, et al.
Nature Methods|January 3, 2024
Improving deep learning protein monomer and complex structure prediction using DeepMSA2 with huge metagenomics dataWei Zheng, Qiqige Wuyun, Yang Li, et al.
Journal of Chemical Theory and Computation|January 31, 2009
Vulnerability in Popular Molecular Dynamics Packages Concerning Langevin and Andersen DynamicsDavid S Cerutti, Robert Duke, Lydia Freddolino, et al.
Nature Protocols|April 28, 2026
Profiling large-scale protein occupancy on bacterial genomes using IPOD-HRRebecca L Hurto, Jeremy W Schroeder, Julian Trouillon, et al.
Pageof 9