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Molecular Ecology Resources|June 1, 2016
An evaluation of transcriptome-based exon capture for frog phylogenomics across multiple scales of divergence (Class: Amphibia, Order: Anura)Daniel M Portik, Lydia L Smith, Ke BiMolecular Phylogenetics and Evolution|October 1, 2022
Phylogeography and taxonomy of Coleonyx elegans Gray 1845 (Squamata: Eublepharidae) in Mesoamerica: The Isthmus of Tehuantepec as an environmental barrierBrett O Butler, Lydia L Smith, Oscar Flores-VillelaMolecular Phylogenetics and Evolution|January 13, 2009
Exploring the radiation of a diverse reef fish family: phylogenetics of the damselfishes (Pomacentridae), with new classifications based on molecular analyses of all generaW James Cooper, Lydia L Smith, Mark W WestneatAmerican Journal of Botany|February 26, 2025
When the sand blossoms: Phylogeny, trait evolution, and geography of speciation in LinanthusIoana G Anghel, Lydia L Smith, Isaac H Lichter-Marck, et al.Molecular Phylogenetics and Evolution|July 16, 2008
Phylogenetic relationships and the evolution of regulatory gene sequences in the parrotfishesLydia L Smith, Jennifer L Fessler, Michael E Alfaro, et al.Proceedings. Biological Sciences|July 19, 2005
Local phylogenetic divergence and global evolutionary convergence of skull function in reef fishes of the family LabridaeMark W Westneat, Michael E Alfaro, Peter C Wainwright, et al.Molecular Ecology Resources|March 13, 2014
Sequence capture using PCR-generated probes: a cost-effective method of targeted high-throughput sequencing for nonmodel organismsJoshua V Peñalba, Lydia L Smith, Maria A Tonione, et al.Molecular Ecology|March 26, 2018
Rapid divergence of mussel populations despite incomplete barriers to dispersalDiede L Maas, Stefan Prost, Ke Bi, et al.Molecular Ecology|September 8, 2025
Patterns of Genetic Diversity Within Three California Quail Species Are Best Explained by Climate and Landscape ChangesPhred M Benham, Carla Cicero, Michelle M Davila, et al.BMC Genomics|May 2, 2023
Highly-multiplexed and efficient long-amplicon PacBio and Nanopore sequencing of hundreds of full mitochondrial genomesBenjamin R Karin, Selene Arellano, Laura Wang, et al.Pageof 2