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Bioinformatics (Oxford, England)|September 9, 2021
VeloViz: RNA velocity-informed embeddings for visualizing cellular trajectoriesLyla Atta, Arpan Sahoo, Jean FanNature Communications|April 29, 2022
Reference-free cell type deconvolution of multi-cellular pixel-resolution spatially resolved transcriptomics dataBrendan F Miller, Feiyang Huang, Lyla Atta, et al.Biorxiv : the Preprint Server for Biology|September 11, 2023
Gene count normalization in single-cell imaging-based spatially resolved transcriptomicsLyla Atta, Kalen Clifton, Manjari Anant, et al.Genome Biology|June 12, 2024
Gene count normalization in single-cell imaging-based spatially resolved transcriptomicsLyla Atta, Kalen Clifton, Manjari Anant, et al.Bioinformatics (Oxford, England)|June 21, 2024
SEraster: a rasterization preprocessing framework for scalable spatial omics data analysisGohta Aihara, Kalen Clifton, Mayling Chen, et al.Nature Communications|December 8, 2023
STalign: Alignment of spatial transcriptomics data using diffeomorphic metric mappingKalen Clifton, Manjari Anant, Gohta Aihara, et al.Biorxiv : the Preprint Server for Biology|April 24, 2023
Alignment of spatial transcriptomics data using diffeomorphic metric mappingKalen Clifton, Manjari Anant, Gohta Aihara, et al.Journal of Clinical Sleep Medicine : JCSM : Official Publication of the American Academy of Sleep Medicine|September 19, 2024
CPAP complications after dacryocystorhinostomy: a narrative reviewArpan Sahoo, Emily Kreibich, Mark Tabor, et al.Nature Communications|January 3, 2025
Characterizing cell-type spatial relationships across length scales in spatially resolved omics dataRafael Dos Santos Peixoto, Brendan F Miller, Maigan A Brusko, et al.Cellular and Molecular Bioengineering|December 8, 2018
Systems Modeling Identifies Divergent Receptor Tyrosine Kinase Reprogramming to MAPK Pathway InhibitionAllison M Claas, Lyla Atta, Simon Gordonov, et al.Pageof 9