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Journal of Molecular Biology|November 21, 2009
The ligand-free state of the TPP riboswitch: a partially folded RNA structureMona Ali, Jan Lipfert, Soenke Seifert, et al.Proceedings of the National Academy of Sciences of the United States of America|April 8, 2014
From a structural average to the conformational ensemble of a DNA bulgeXuesong Shi, Kyle A Beauchamp, Pehr B Harbury, et al.RNA (New York, N.Y.)|March 3, 2010
Dissecting electrostatic screening, specific ion binding, and ligand binding in an energetic model for glycine riboswitch foldingJan Lipfert, Adelene Y L Sim, Daniel Herschlag, et al.Biophysical Journal|July 3, 2007
Evaluation of ion binding to DNA duplexes using a size-modified Poisson-Boltzmann theoryVincent B Chu, Yu Bai, Jan Lipfert, et al.Current Opinion in Chemical Biology|December 17, 2008
A repulsive field: advances in the electrostatics of the ion atmosphereVincent B Chu, Yu Bai, Jan Lipfert, et al.ACS Chemical Biology|March 6, 2009
Evaluating the potential for halogen bonding in the oxyanion hole of ketosteroid isomerase using unnatural amino acid mutagenesisDaniel A Kraut, Michael J Churchill, Phillip E Dawson, et al.Proceedings of the National Academy of Sciences of the United States of America|January 19, 2010
Dissecting the paradoxical effects of hydrogen bond mutations in the ketosteroid isomerase oxyanion holeDaniel A Kraut, Paul A Sigala, Timothy D Fenn, et al.Journal of Molecular Biology|April 17, 2002
RNA simulations: probing hairpin unfolding and the dynamics of a GNRA tetraloopEric J Sorin, Mark A Engelhardt, Daniel Herschlag, et al.Journal of the American Chemical Society|April 24, 2008
Direct measurement of tertiary contact cooperativity in RNA foldingBernie D Sattin, Wei Zhao, Kevin Travers, et al.Journal of the American Chemical Society|November 8, 2011
Evaluating the catalytic contribution from the oxyanion hole in ketosteroid isomeraseJason P Schwans, Fanny Sunden, Ana Gonzalez, et al.Pageof 22