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Biorxiv : the Preprint Server for Biology|June 10, 2024
Cosine Similarity Estimation Using FracMinHash: Theoretical Analysis, Safety Conditions, and ImplementationMahmudur Rahman Hera, David KoslickiAlgorithms for Molecular Biology : AMB|May 15, 2025
Estimating similarity and distance using FracMinHashMahmudur Rahman Hera, David KoslickiBiorxiv : the Preprint Server for Biology|November 26, 2025
MaxGeomHash: An Algorithm for Variable-Size Random Sampling of Distinct ElementsMahmudur Rahman Hera, David Koslicki, Conrado MartínezBiorxiv : the Preprint Server for Biology|November 26, 2025
Leveraging FracMinHash Containment for Genomic <math><msub><mrow><mi>d</mi></mrow> <mrow><mi>N</mi></mrow></msub> <mo>/</mo> <msub><mrow><mi>d</mi></mrow> <mrow><mi>S</mi></mrow></msub></math>Judith S Rodriguez, Mahmudur Rahman Hera, David KoslickiBiorxiv : the Preprint Server for Biology|June 4, 2025
Estimation of substitution and indel rates via <i>k</i> -mer statisticsMahmudur Rahman Hera, Paul Medvedev, David Koslicki, et al.Genome Research|June 21, 2023
Deriving confidence intervals for mutation rates across a wide range of evolutionary distances using FracMinHashMahmudur Rahman Hera, N Tessa Pierce-Ward, David KoslickiAlgorithms for Molecular Biology : AMB|July 10, 2026
Estimation of substitution and indel rates via k-mer statisticsMahmudur Rahman Hera, Paul Medvedev, David Koslicki, et al.Algorithms in Bioinformatics : ... International Workshop, WABI ..., Proceedings. WABI (Workshop)|April 23, 2026
Estimation of substitution and indel rates via <i>k</i>-mer statisticsMahmudur Rahman Hera, Paul Medvedev, David Koslicki, et al.Bioinformatics (Oxford, England)|September 4, 2024
Metagenomic functional profiling: to sketch or not to sketch?Mahmudur Rahman Hera, Shaopeng Liu, Wei Wei, et al.Bioinformatics (Oxford, England)|February 15, 2011
Topological entropy of DNA sequencesDavid KoslickiPageof 6