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Journal of Computational Chemistry|July 21, 2020
High-performance transformation of protein structure representation from internal to Cartesian coordinatesMahsa Bayati, Miriam Leeser, Jaydeep P BardhanThe Journal of Chemical Physics|December 3, 2008
Interpreting the Coulomb-field approximation for generalized-Born electrostatics using boundary-integral equation theoryJaydeep P BardhanJournal of the Mechanical Behavior of Materials|December 16, 2014
Gradient Models in Molecular Biophysics: Progress, Challenges, OpportunitiesJaydeep P BardhanThe Journal of Chemical Physics|September 22, 2011
Nonlocal continuum electrostatic theory predicts surprisingly small energetic penalties for charge burial in proteinsJaydeep P BardhanThe Journal of Chemical Physics|March 12, 2009
Numerical solution of boundary-integral equations for molecular electrostaticsJaydeep P BardhanThe Journal of Chemical Physics|October 7, 2011
Mathematical analysis of the boundary-integral based electrostatics estimation approximation for molecular solvation: exact results for spherical inclusionsJaydeep P Bardhan, Matthew G KnepleyThe Journal of Chemical Physics|October 10, 2014
Communication: modeling charge-sign asymmetric solvation free energies with nonlinear boundary conditionsJaydeep P Bardhan, Matthew G KnepleyThe Journal of Chemical Physics|October 2, 2012
Affine-response model of molecular solvation of ions: Accurate predictions of asymmetric charging free energiesJaydeep P Bardhan, Pavel Jungwirth, Lee MakowskiMolecular Based Mathematical Biology|August 15, 2015
Nonlocal Electrostatics in Spherical Geometries Using Eigenfunction Expansions of Boundary-Integral OperatorsJaydeep P Bardhan, Matthew G Knepley, Peter BrunePhysical Review. E, Statistical, Nonlinear, and Soft Matter Physics|August 8, 2009
Discretization of the induced-charge boundary integral equationJaydeep P Bardhan, Robert S Eisenberg, Dirk GillespiePageof 4