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Plos Computational Biology|June 5, 2026
A multiscale, Bayesian inference approach to augment mechanistic models of cell signaling with machine-learning predictions of binding affinityHolly A Huber, Stacey D FinleyIscience|September 4, 2023
Genome-scale modeling predicts metabolic differences between macrophage subtypes in colorectal cancerPatrick E Gelbach, Stacey D FinleyBiotechnology Progress|September 29, 2011
Timescale analysis of rule-based biochemical reaction networksDavid J Klinke, Stacey D FinleyJournal of the National Cancer Institute|May 15, 2013
Effect of tumor microenvironment on tumor VEGF during anti-VEGF treatment: systems biology predictionsStacey D Finley, Aleksander S PopelThe AAPS Journal|May 2, 2012
Predicting the effects of anti-angiogenic agents targeting specific VEGF isoformsStacey D Finley, Aleksander S PopelBiorxiv : the Preprint Server for Biology|July 17, 2025
Multiscale Probabilistic Modeling: A Bayesian Approach to Augment Mechanistic Models of Cell Signaling with Machine-Learning Predictions of Binding AffinityHolly A Huber, Stacey D FinleyAPL Bioengineering|December 30, 2020
An optimal control approach for enhancing natural killer cells' secretion of cytolytic moleculesSahak Z Makaryan, Stacey D FinleyPlos Computational Biology|December 28, 2020
Multi-scale modeling of macrophage-T cell interactions within the tumor microenvironmentColin G Cess, Stacey D FinleyTrends in Cancer|July 18, 2019
Integrative Approaches to Cancer ImmunotherapyGregory L Szeto, Stacey D FinleyNPJ Systems Biology and Applications|July 31, 2023
A data-driven Boolean model explains memory subsets and evolution in CD8+ T cell exhaustionGeena V Ildefonso, Stacey D FinleyPageof 11