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BMC Bioinformatics|February 24, 2023
PriPath: identifying dysregulated pathways from differential gene expression via grouping, scoring, and modeling with an embedded feature selection approachMalik Yousef, Fatma Ozdemir, Amhar Jaber, et al.
Computers in Biology and Medicine|September 18, 2024
CCPred: Global and population-specific colorectal cancer prediction and metagenomic biomarker identification at different molecular levels using machine learning techniquesBurcu Bakir-Gungor, Mustafa Temiz, Yasin Inal, et al.
The Israel Medical Association Journal : IMAJ|April 13, 2022
Correlates of Hookah Smoking among Arab Adults in Israel Identified by a Machine Learning AlgorithmMohammad Khatib, Ahmad Sheikh Muhammad, Salam Hadid, et al.
BMC Bioinformatics|October 17, 2009
Classification and biomarker identification using gene network modules and support vector machinesMalik Yousef, Mohamed Ketany, Larry Manevitz, et al.
Frontiers in Microbiology|September 13, 2021
Discovering Potential Taxonomic Biomarkers of Type 2 Diabetes From Human Gut Microbiota via Different Feature Selection MethodsBurcu Bakir-Gungor, Osman Bulut, Amhar Jabeer, et al.
Bioinformatics (Oxford, England)|October 11, 2007
Naïve Bayes for microRNA target predictions--machine learning for microRNA targetsMalik Yousef, Segun Jung, Andrew V Kossenkov, et al.
Frontiers in Genetics|April 3, 2023
Invention of 3Mint for feature grouping and scoring in multi-omicsMiray Unlu Yazici, J S Marron, Burcu Bakir-Gungor, et al.
Plos One|June 27, 2025
3Mont: A multi-omics integrative tool for breast cancer subtype stratificationMiray Unlu Yazici, J S Marron, Burcu Bakir-Gungor, et al.
F1000Research|January 28, 2021
Recursive Cluster Elimination based Rank Function (SVM-RCE-R) implemented in KNIMEMalik Yousef, Burcu Bakir-Gungor, Amhar Jabeer, et al.
Peerj|May 2, 2022
Inflammatory bowel disease biomarkers of human gut microbiota selected via different feature selection methodsBurcu Bakir-Gungor, Hilal Hacılar, Amhar Jabeer, et al.
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