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Bioinformatics (Oxford, England)|November 18, 2004
Multiple sequence alignment with user-defined constraints at GOBICSBurkhard Morgenstern, Nadine Werner, Sonja J Prohaska, et al.Bioinformatics (Oxford, England)|November 9, 2023
RNA interaction format: a general data format for RNA interactionsRichard A Schäfer, Dominik Rabsch, Guillaume E Scholz, et al.Journal of Chemical Information and Modeling|December 3, 2025
SynKit: A Graph-Based Python Framework for Rule-Based Reaction Modeling and AnalysisTieu-Long Phan, Marcos E González Laffitte, Klaus Weinbauer, et al.Oncotarget|December 16, 2025
Machine learning-based survival prediction in colorectal cancer combining clinical and biological featuresLucas M Vieira, Natasha A N Jorge, João B Sousa, et al.Journal of Molecular Evolution|March 30, 2010
Nematode sbRNAs: homologs of vertebrate Y RNAsIlenia Boria, Andreas R Gruber, Andrea Tanzer, et al.International Journal of Molecular Sciences|March 17, 2019
Cellular Gene Expression during Hepatitis C Virus Replication as Revealed by Ribosome ProfilingGesche K Gerresheim, Jochen Bathke, Audrey M Michel, et al.IEEE/ACM Transactions on Computational Biology and Bioinformatics|December 17, 2013
2D meets 4G: G-quadruplexes in RNA secondary structure predictionRonny Lorenz, Stephan H Bernhart, Jing Qin, et al.Algorithms for Molecular Biology : AMB|April 21, 2020
From pairs of most similar sequences to phylogenetic best matchesPeter F Stadler, Manuela Geiß, David Schaller, et al.Genes|April 8, 2014
Clustering rfam 10.1: clans, families, and classesFelipe A Lessa, Tainá Raiol, Marcelo M Brigido, et al.Journal of Molecular Biology|April 29, 2008
Folding kinetics of large RNAsMichael Geis, Christoph Flamm, Michael T Wolfinger, et al.Pageof 57