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NPJ Systems Biology and Applications
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June 15, 2026
Intelligent tool orchestration for rapid mechanistic model prototyping: MCP servers as AI-biology interfaces
Marco Ruscone, Miguel Vazquez, Alfonso Valencia
Gigabyte (Hong Kong, China)
|
October 25, 2024
PhysiMeSS - a new physiCell addon for extracellular matrix modelling
Vincent Noël, Marco Ruscone, Robyn Shuttleworth, et al.
Scientific Reports
|
March 27, 2026
Mesenchymal to epithelial transition (MET) in cancer progression: insights from logical modeling
Sophia Orozco-Ruiz, Marco Ruscone, Emmanuel Barillot, et al.
Briefings in Bioinformatics
|
October 19, 2024
Building multiscale models with PhysiBoSS, an agent-based modeling tool
Marco Ruscone, Andrea Checcoli, Randy Heiland, et al.
Frontiers in Molecular Biosciences
|
December 10, 2021
WebMaBoSS: A Web Interface for Simulating Boolean Models Stochastically
Vincent Noël, Marco Ruscone, Gautier Stoll, et al.
Arxiv
|
July 9, 2024
Building multiscale models with PhysiBoSS, an agent-based modeling tool
Marco Ruscone, Andrea Checcoli, Randy Heiland, et al.
Biorxiv : the Preprint Server for Biology
|
November 14, 2023
PhysiCell Studio: a graphical tool to make agent-based modeling more accessible
Randy Heiland, Daniel Bergman, Blair Lyons, et al.
Bioinformatics (Oxford, England)
|
June 8, 2023
Multiscale model of the different modes of cancer cell invasion
Marco Ruscone, Arnau Montagud, Philippe Chavrier, et al.
Gigabyte (Hong Kong, China)
|
July 1, 2024
PhysiCell Studio: a graphical tool to make agent-based modeling more accessible
Randy Heiland, Daniel Bergman, Blair Lyons, et al.
Plos Computational Biology
|
September 16, 2025
NeKo: A tool for automatic network construction from prior knowledge
Marco Ruscone, Eirini Tsirvouli, Andrea Checcoli, et al.
Page
of 2
Search research articles
Search
Showing results (1-10 of 12) with videos related to
Sort By:
Page
of 2
NPJ Systems Biology and Applications
|
June 15, 2026
Intelligent tool orchestration for rapid mechanistic model prototyping: MCP servers as AI-biology interfaces
Marco Ruscone, Miguel Vazquez, Alfonso Valencia
Gigabyte (Hong Kong, China)
|
October 25, 2024
PhysiMeSS - a new physiCell addon for extracellular matrix modelling
Vincent Noël, Marco Ruscone, Robyn Shuttleworth, et al.
Scientific Reports
|
March 27, 2026
Mesenchymal to epithelial transition (MET) in cancer progression: insights from logical modeling
Sophia Orozco-Ruiz, Marco Ruscone, Emmanuel Barillot, et al.
Briefings in Bioinformatics
|
October 19, 2024
Building multiscale models with PhysiBoSS, an agent-based modeling tool
Marco Ruscone, Andrea Checcoli, Randy Heiland, et al.
Frontiers in Molecular Biosciences
|
December 10, 2021
WebMaBoSS: A Web Interface for Simulating Boolean Models Stochastically
Vincent Noël, Marco Ruscone, Gautier Stoll, et al.
Arxiv
|
July 9, 2024
Building multiscale models with PhysiBoSS, an agent-based modeling tool
Marco Ruscone, Andrea Checcoli, Randy Heiland, et al.
Biorxiv : the Preprint Server for Biology
|
November 14, 2023
PhysiCell Studio: a graphical tool to make agent-based modeling more accessible
Randy Heiland, Daniel Bergman, Blair Lyons, et al.
Bioinformatics (Oxford, England)
|
June 8, 2023
Multiscale model of the different modes of cancer cell invasion
Marco Ruscone, Arnau Montagud, Philippe Chavrier, et al.
Gigabyte (Hong Kong, China)
|
July 1, 2024
PhysiCell Studio: a graphical tool to make agent-based modeling more accessible
Randy Heiland, Daniel Bergman, Blair Lyons, et al.
Plos Computational Biology
|
September 16, 2025
NeKo: A tool for automatic network construction from prior knowledge
Marco Ruscone, Eirini Tsirvouli, Andrea Checcoli, et al.
Page
of 2