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The Journal of Chemical Physics|November 11, 2011
Comparison of chemical and thermal protein denaturation by combination of computational and experimental approaches. IIQian Wang, Alexander Christiansen, Antonios Samiotakis, et al.Journal of Molecular Biology|November 17, 2009
Residue-specific analysis of frustration in the folding landscape of repeat beta/alpha protein apoflavodoxinLoren Stagg, Antonios Samiotakis, Dirar Homouz, et al.The Journal of Physical Chemistry. B|October 14, 2010
Biophysical properties of membrane-active peptides based on micelle modeling: a case study of cell-penetrating and antimicrobial peptidesQian Wang, Gongyi Hong, Glenn R Johnson, et al.Proceedings of the National Academy of Sciences of the United States of America|August 14, 2008
Crowded, cell-like environment induces shape changes in aspherical proteinDirar Homouz, Michael Perham, Antonios Samiotakis, et al.Plos Computational Biology|May 9, 2022
A generalized Flory-Stockmayer kinetic theory of connectivity percolation and rigidity percolation of cytoskeletal networksCarlos Bueno, James Liman, Nicholas P Schafer, et al.Plos Computational Biology|August 11, 2011
The effect of macromolecular crowding, ionic strength and calcium binding on calmodulin dynamicsQian Wang, Kao-Chen Liang, Arkadiusz Czader, et al.Protein Science : a Publication of the Protein Society|January 26, 2025
CaXML: Chemistry-informed machine learning explains mutual changes between protein conformations and calcium ions in calcium-binding proteins using structural and topological featuresPengzhi Zhang, Jules Nde, Yossi Eliaz, et al.The Journal of Physical Chemistry. B|February 23, 2012
Multiscale simulation on a light-harvesting molecular triadGuoxiong Su, Arkadiusz Czader, Dirar Homouz, et al.Physical Review. E|May 20, 2018
Impact of hydrodynamic interactions on protein folding rates depends on temperatureFabio C Zegarra, Dirar Homouz, Yossi Eliaz, et al.Arxiv|August 7, 2024
Chemistry-informed Machine Learning Explains Calcium-binding Proteins' Fuzzy Shape for Communicating Changes in the Atomic States of Calcium IonsPengzhi Zhang, Jules Nde, Yossi Eliaz, et al.Pageof 9