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Nature Methods|June 8, 2026
A scalable approach to investigating sequence-to-function predictions from personal genomesAnna E Spiro, Xinming Tu, Yilun Sheng, et al.
Nature Immunology|January 10, 2024
Memory B cell subsets have divergent developmental origins that are coupled to distinct imprinted epigenetic statesDerrick Callahan, Shuchi Smita, Stephen Joachim, et al.
Molecular and Cellular Biology|October 3, 2012
Involvement of histone demethylase LSD1 in short-time-scale gene expression changes during cell cycle progression in embryonic stem cellsVenugopalan D Nair, Yongchao Ge, Natarajan Balasubramaniyan, et al.
The Journal of Clinical Investigation|June 13, 2017
Differential requirements for myeloid leukemia IFN-γ conditioning determine graft-versus-leukemia resistance and sensitivityCatherine Matte-Martone, Jinling Liu, Meng Zhou, et al.
Science Immunology|February 17, 2023
IL-21R signal reprogramming cooperates with CD40 and BCR signals to select and differentiate germinal center B cellsWei Luo, Laura Conter, Rebecca A Elsner, et al.
Elife|October 17, 2017
Subterranean mammals show convergent regression in ocular genes and enhancers, along with adaptation to tunnelingRaghavendran Partha, Bharesh K Chauhan, Zelia Ferreira, et al.
Biorxiv : the Preprint Server for Biology|March 10, 2025
ERC 2.0 - evolutionary rate covariation update improves inference of functional interactions across large phylogeniesJordan Little, Guillermo Hoffmann Meyer, Aakash Grover, et al.
Biorxiv : the Preprint Server for Biology|December 18, 2023
RERconverge Expansion: Using Relative Evolutionary Rates to Study Complex Categorical Trait EvolutionRuby Redlich, Amanda Kowalczyk, Michael Tene, et al.
Biorxiv : the Preprint Server for Biology|March 30, 2023
Benchmarking of deep neural networks for predicting personal gene expression from DNA sequence highlights shortcomingsAlexander Sasse, Bernard Ng, Anna E Spiro, et al.
Nature Genetics|November 30, 2023
Benchmarking of deep neural networks for predicting personal gene expression from DNA sequence highlights shortcomingsAlexander Sasse, Bernard Ng, Anna E Spiro, et al.
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