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Physical Review Letters|June 11, 2013
Maximum likelihood reconstruction for Ising models with asynchronous updatesHong-Li Zeng, Mikko Alava, Erik Aurell, et al.Journal of the Royal Society, Interface|August 31, 2012
Quasi-potential landscape in complex multi-stable systemsJoseph Xu Zhou, M D S Aliyu, Erik Aurell, et al.Physical Biology|January 4, 2019
DCA for genome-wide epistasis analysis: the statistical genetics perspectiveChen-Yi Gao, Fabio Cecconi, Angelo Vulpiani, et al.Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics|June 18, 2013
Witness of unsatisfiability for a random 3-satisfiability formulaLu-Lu Wu, Hai-Jun Zhou, Mikko Alava, et al.Proceedings of the National Academy of Sciences of the United States of America|November 18, 2020
Global analysis of more than 50,000 SARS-CoV-2 genomes reveals epistasis between eight viral genesHong-Li Zeng, Vito Dichio, Edwin Rodríguez Horta, et al.Physical Biology|November 13, 2024
Two fitness inference schemes compared using allele frequencies from 1068 391 sequences sampled in the UK during the COVID-19 pandemicHong-Li Zeng, Cheng-Long Yang, Bo Jing, et al.Nucleic Acids Research|April 21, 2017
Landscape of RNA polyadenylation in E. coliAlexandre Maes, Céline Gracia, Nicolas Innocenti, et al.Biological Cybernetics|March 29, 2002
Mechanisms for lateral turns in lamprey in response to descending unilateral commands: a modeling studyAlexander K Kozlov, Fredrik Ullén, Patriq Fagerstedt, et al.Proceedings of the National Academy of Sciences of the United States of America|October 4, 2008
Circumspect descent prevails in solving random constraint satisfaction problemsMikko Alava, John Ardelius, Erik Aurell, et al.Pageof 29