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Systematic Biology|July 4, 2020
Defining Species When There is Gene FlowXiyun Jiao, Ziheng Yang
Nature Reviews. Genetics|March 30, 2012
Molecular phylogenetics: principles and practiceZiheng Yang, Bruce Rannala
Molecular Biology and Evolution|April 17, 2012
Maximum likelihood implementation of an isolation-with-migration model with three species for testing speciation with gene flowTianqi Zhu, Ziheng Yang
Molecular Biology and Evolution|September 24, 2005
Bayesian estimation of species divergence times under a molecular clock using multiple fossil calibrations with soft boundsZiheng Yang, Bruce Rannala
Molecular Ecology|March 11, 2017
Bayesian species identification under the multispecies coalescent provides significant improvements to DNA barcoding analysesZiheng Yang, Bruce Rannala
Molecular Biology and Evolution|April 13, 2022
Estimation of Cross-Species Introgression Rates Using Genomic Data Despite Model UnidentifiabilityZiheng Yang, Tomáš Flouri
Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences|February 20, 2025
Reading tree leaves: inferring speciation anfd extinction processes using phylogeniesBruce Rannala, Ziheng Yang
Plos One|May 30, 2008
Duplicated paralogous genes subject to positive selection in the genome of Trypanosoma bruceiRichard D Emes, Ziheng Yang
Systematic Biology|June 8, 2010
Bayesian dating of shallow phylogenies with a relaxed clockRichard P Brown, Ziheng Yang
Proceedings of the National Academy of Sciences of the United States of America|November 13, 2013
Searching for efficient Markov chain Monte Carlo proposal kernelsZiheng Yang, Carlos E Rodríguez
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