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Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences|October 5, 2020
Metagenomics of the modern and historical human oral microbiome with phylogenetic studies on Streptococcus mutans and Streptococcus sobrinusMark Achtman, Zhemin Zhou
Bioinformatics (Oxford, England)|April 6, 2021
HierCC: a multi-level clustering scheme for population assignments based on core genome MLSTZhemin Zhou, Jane Charlesworth, Mark Achtman
Plos One|August 15, 2015
Formal Comment to Pettengill: The Time to Most Recent Common Ancestor Does Not (Usually) Approximate the Date of DivergenceMark Achtman, Zhemin Zhou, Xavier Didelot
Genome Research|October 15, 2020
Accurate reconstruction of bacterial pan- and core genomes with PEPPANZhemin Zhou, Jane Charlesworth, Mark Achtman
Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences|August 22, 2022
EnteroBase: hierarchical clustering of 100 000s of bacterial genomes into species/subspecies and populationsMark Achtman, Zhemin Zhou, Jane Charlesworth, et al.
Plos Genetics|April 6, 2018
A genomic overview of the population structure of SalmonellaNabil-Fareed Alikhan, Zhemin Zhou, Martin J Sergeant, et al.
Genome Research|December 7, 2019
The EnteroBase user's guide, with case studies on Salmonella transmissions, Yersinia pestis phylogeny, and Escherichia core genomic diversityZhemin Zhou, Nabil-Fareed Alikhan, Khaled Mohamed, et al.
Plos Genetics|September 27, 2021
Genomic population structure associated with repeated escape of Salmonella enterica ATCC14028s from the laboratory into natureMark Achtman, Frederik Van den Broeck, Kerry K Cooper, et al.
Plos Genetics|March 14, 2015
The role of China in the global spread of the current cholera pandemicXavier Didelot, Bo Pang, Zhemin Zhou, et al.
Proceedings of the National Academy of Sciences of the United States of America|August 6, 2014
Transient Darwinian selection in Salmonella enterica serovar Paratyphi A during 450 years of global spread of enteric feverZhemin Zhou, Angela McCann, François-Xavier Weill, et al.
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