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Infection, Genetics and Evolution : Journal of Molecular Epidemiology and Evolutionary Genetics in Infectious Diseases|November 30, 2004
Methods of quantifying and visualising outbreaks of tuberculosis using genotypic informationMark M Tanaka, Andrew R FrancisProceedings of the National Academy of Sciences of the United States of America|October 4, 2006
Detecting emerging strains of tuberculosis by using spoligotypesMark M Tanaka, Andrew R FrancisBMC Evolutionary Biology|April 24, 2012
Evolution of variation in presence and absence of genes in bacterial pathwaysAndrew R Francis, Mark M TanakaBMC Infectious Diseases|June 8, 2006
An evaluation of indices for quantifying tuberculosis transmission using genotypes of pathogen isolatesMark M Tanaka, Renault Phong, Andrew R FrancisInfection, Genetics and Evolution : Journal of Molecular Epidemiology and Evolutionary Genetics in Infectious Diseases|February 5, 2008
Interpreting genotype cluster sizes of Mycobacterium tuberculosis isolates typed with IS6110 and spoligotypingFabio Luciani, Andrew R Francis, Mark M TanakaJournal of Theoretical Biology|September 18, 2025
Stably encoding phylogenetic trees with folios of leaf addressesMark M Tanaka, Ruiting Lan, Andrew R FrancisBMC Bioinformatics|November 28, 2008
Models of deletion for visualizing bacterial variation: an application to tuberculosis spoligotypesJosephine F Reyes, Andrew R Francis, Mark M TanakaPlos Computational Biology|February 20, 2010
Conditions for the evolution of gene clusters in bacterial genomesSara Ballouz, Andrew R Francis, Ruiting Lan, et al.Genetics|April 21, 2006
Using approximate Bayesian computation to estimate tuberculosis transmission parameters from genotype dataMark M Tanaka, Andrew R Francis, Fabio Luciani, et al.Journal of Mathematical Biology|June 25, 2013
Group-theoretic models of the inversion process in bacterial genomesAttila Egri-Nagy, Volker Gebhardt, Mark M Tanaka, et al.Pageof 10