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BMC Evolutionary Biology|January 25, 2013
Molecular decay of enamel matrix protein genes in turtles and other edentulous amniotesRobert W Meredith, John Gatesy, Mark S SpringerTrends in Ecology & Evolution|May 6, 2014
Molecular evolution tracks macroevolutionary transitions in CetaceaMichael R McGowen, John Gatesy, Derek E WildmanMolecular Phylogenetics and Evolution|June 15, 2014
Dubious resolution and support from published sparse supermatrices: the importance of thorough tree searchesMark P Simmons, Pablo A GoloboffMolecular Phylogenetics and Evolution|July 9, 2002
Uninode coding vs gene tree parsimony for phylogenetic reconstruction using duplicate genesMark P Simmons, John V FreudensteinMolecular Phylogenetics and Evolution|June 28, 2011
Spurious 99% bootstrap and jackknife support for unsupported cladesMark P Simmons, John V FreudensteinMolecular Phylogenetics and Evolution|February 14, 2013
Quantification and relative severity of inflated branch-support values generated by alternative methods: an empirical exampleMark P Simmons, Andrew P NortonSystematic Biology|July 31, 2014
Bias in tree searches and its consequences for measuring group supportsPablo A Goloboff, Mark P SimmonsMolecular Phylogenetics and Evolution|February 8, 2014
Divergent maximum-likelihood-branch-support values for polytomiesMark P Simmons, Andrew P NortonMolecular Phylogenetics and Evolution|June 15, 2013
An artifact caused by undersampling optimal trees in supermatrix analyses of locally sampled charactersMark P Simmons, Pablo A GoloboffMolecular Phylogenetics and Evolution|March 20, 2003
The effects of increasing genetic distance on alignment of, and tree construction from, rDNA internal transcribed spacer sequencesMark P Simmons, John V FreudensteinPageof 14